Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tpm4Q6IRU2 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Tpm4Q6IRU2 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.1■□□□□ 0.81
Tpm4Q6IRU2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.1■□□□□ 0.81
Tpm4Q6IRU2 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tpm4Q6IRU2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tpm4Q6IRU2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tpm4Q6IRU2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tpm4Q6IRU2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tpm4Q6IRU2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tpm4Q6IRU2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tpm4Q6IRU2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tpm4Q6IRU2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC20.09■□□□□ 0.81
Tpm4Q6IRU2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.09■□□□□ 0.81
Tpm4Q6IRU2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tpm4Q6IRU2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.09■□□□□ 0.81
Tpm4Q6IRU2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tpm4Q6IRU2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tpm4Q6IRU2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tpm4Q6IRU2 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.09■□□□□ 0.81
Tpm4Q6IRU2 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.09■□□□□ 0.81
Tpm4Q6IRU2 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Tpm4Q6IRU2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.09■□□□□ 0.81
Tpm4Q6IRU2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tpm4Q6IRU2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tpm4Q6IRU2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tpm4Q6IRU2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tpm4Q6IRU2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Tpm4Q6IRU2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tpm4Q6IRU2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tpm4Q6IRU2 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tpm4Q6IRU2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tpm4Q6IRU2 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Tpm4Q6IRU2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.08■□□□□ 0.81
Tpm4Q6IRU2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Tpm4Q6IRU2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.08■□□□□ 0.81
Tpm4Q6IRU2 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Tpm4Q6IRU2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Tpm4Q6IRU2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Tpm4Q6IRU2 Reep4-203ENSMUST00000226563 1444 ntBASIC20.08■□□□□ 0.8
Tpm4Q6IRU2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.08■□□□□ 0.8
Tpm4Q6IRU2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tpm4Q6IRU2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tpm4Q6IRU2 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tpm4Q6IRU2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tpm4Q6IRU2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tpm4Q6IRU2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.07■□□□□ 0.8
Tpm4Q6IRU2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tpm4Q6IRU2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tpm4Q6IRU2 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Tpm4Q6IRU2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tpm4Q6IRU2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.07■□□□□ 0.8
Tpm4Q6IRU2 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tpm4Q6IRU2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tpm4Q6IRU2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tpm4Q6IRU2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Tpm4Q6IRU2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Tpm4Q6IRU2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tpm4Q6IRU2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tpm4Q6IRU2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tpm4Q6IRU2 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tpm4Q6IRU2 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.06■□□□□ 0.8
Tpm4Q6IRU2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.06■□□□□ 0.8
Tpm4Q6IRU2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.06■□□□□ 0.8
Tpm4Q6IRU2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tpm4Q6IRU2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tpm4Q6IRU2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tpm4Q6IRU2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tpm4Q6IRU2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tpm4Q6IRU2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tpm4Q6IRU2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.05■□□□□ 0.8
Tpm4Q6IRU2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tpm4Q6IRU2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tpm4Q6IRU2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.05■□□□□ 0.8
Tpm4Q6IRU2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tpm4Q6IRU2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tpm4Q6IRU2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tpm4Q6IRU2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Tpm4Q6IRU2 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.04■□□□□ 0.8
Tpm4Q6IRU2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.04■□□□□ 0.8
Tpm4Q6IRU2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tpm4Q6IRU2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tpm4Q6IRU2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tpm4Q6IRU2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Tpm4Q6IRU2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tpm4Q6IRU2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
Tpm4Q6IRU2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tpm4Q6IRU2 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tpm4Q6IRU2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tpm4Q6IRU2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tpm4Q6IRU2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tpm4Q6IRU2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Tpm4Q6IRU2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tpm4Q6IRU2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.03■□□□□ 0.8
Tpm4Q6IRU2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tpm4Q6IRU2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.03■□□□□ 0.8
Tpm4Q6IRU2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tpm4Q6IRU2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tpm4Q6IRU2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tpm4Q6IRU2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms