Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Sdc3Q64519 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sdc3Q64519 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sdc3Q64519 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdc3Q64519 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdc3Q64519 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Sdc3Q64519 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Sdc3Q64519 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdc3Q64519 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdc3Q64519 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sdc3Q64519 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.21■□□□□ 0.35
Sdc3Q64519 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdc3Q64519 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdc3Q64519 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdc3Q64519 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdc3Q64519 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdc3Q64519 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdc3Q64519 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Sdc3Q64519 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sdc3Q64519 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sdc3Q64519 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Sdc3Q64519 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sdc3Q64519 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sdc3Q64519 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.2■□□□□ 0.34
Sdc3Q64519 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sdc3Q64519 Gm5643-201ENSMUST00000117081 966 ntBASIC17.2■□□□□ 0.34
Sdc3Q64519 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.2■□□□□ 0.34
Sdc3Q64519 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.2■□□□□ 0.34
Sdc3Q64519 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Sdc3Q64519 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Sdc3Q64519 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sdc3Q64519 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sdc3Q64519 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Sdc3Q64519 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Sdc3Q64519 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sdc3Q64519 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sdc3Q64519 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sdc3Q64519 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.19■□□□□ 0.34
Sdc3Q64519 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sdc3Q64519 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sdc3Q64519 Gm22325-201ENSMUST00000158904 308 ntBASIC17.19■□□□□ 0.34
Sdc3Q64519 Mtag2-201ENSMUST00000058665 714 ntBASIC17.19■□□□□ 0.34
Sdc3Q64519 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sdc3Q64519 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sdc3Q64519 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sdc3Q64519 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Sdc3Q64519 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Sdc3Q64519 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sdc3Q64519 Flg-201ENSMUST00000050758 1488 ntBASIC17.18■□□□□ 0.34
Sdc3Q64519 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdc3Q64519 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Sdc3Q64519 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdc3Q64519 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.18■□□□□ 0.34
Sdc3Q64519 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Sdc3Q64519 Gm11927-201ENSMUST00000118472 759 ntBASIC17.18■□□□□ 0.34
Sdc3Q64519 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.18■□□□□ 0.34
Sdc3Q64519 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.18■□□□□ 0.34
Sdc3Q64519 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdc3Q64519 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.18■□□□□ 0.34
Sdc3Q64519 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdc3Q64519 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdc3Q64519 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdc3Q64519 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdc3Q64519 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Sdc3Q64519 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdc3Q64519 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.18■□□□□ 0.34
Sdc3Q64519 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdc3Q64519 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.18■□□□□ 0.34
Sdc3Q64519 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sdc3Q64519 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdc3Q64519 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.17■□□□□ 0.34
Sdc3Q64519 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdc3Q64519 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sdc3Q64519 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.17■□□□□ 0.34
Sdc3Q64519 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sdc3Q64519 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.17■□□□□ 0.34
Sdc3Q64519 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.17■□□□□ 0.34
Sdc3Q64519 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdc3Q64519 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Sdc3Q64519 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
Sdc3Q64519 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdc3Q64519 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.16■□□□□ 0.34
Sdc3Q64519 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc3Q64519 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc3Q64519 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.16■□□□□ 0.34
Sdc3Q64519 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc3Q64519 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc3Q64519 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Sdc3Q64519 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Sdc3Q64519 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Sdc3Q64519 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Sdc3Q64519 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc3Q64519 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc3Q64519 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Sdc3Q64519 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.16■□□□□ 0.34
Sdc3Q64519 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc3Q64519 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc3Q64519 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc3Q64519 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.16■□□□□ 0.34
Sdc3Q64519 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms