Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Six2Q62232 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
Six2Q62232 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.15■□□□□ 0.66
Six2Q62232 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.15■□□□□ 0.66
Six2Q62232 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Six2Q62232 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Six2Q62232 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Six2Q62232 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.15■□□□□ 0.66
Six2Q62232 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Six2Q62232 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Six2Q62232 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Six2Q62232 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Six2Q62232 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Six2Q62232 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
Six2Q62232 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Six2Q62232 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Six2Q62232 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Six2Q62232 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Six2Q62232 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Six2Q62232 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Six2Q62232 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Six2Q62232 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.14■□□□□ 0.65
Six2Q62232 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Six2Q62232 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Six2Q62232 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.14■□□□□ 0.65
Six2Q62232 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six2Q62232 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six2Q62232 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six2Q62232 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six2Q62232 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six2Q62232 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six2Q62232 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six2Q62232 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six2Q62232 Gm11927-201ENSMUST00000118472 759 ntBASIC19.13■□□□□ 0.65
Six2Q62232 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.13■□□□□ 0.65
Six2Q62232 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Six2Q62232 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six2Q62232 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six2Q62232 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Six2Q62232 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six2Q62232 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six2Q62232 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six2Q62232 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.13■□□□□ 0.65
Six2Q62232 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Six2Q62232 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six2Q62232 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Six2Q62232 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Six2Q62232 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Six2Q62232 Flg-201ENSMUST00000050758 1488 ntBASIC19.12■□□□□ 0.65
Six2Q62232 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Six2Q62232 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Six2Q62232 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Six2Q62232 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.12■□□□□ 0.65
Six2Q62232 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Six2Q62232 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Six2Q62232 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.12■□□□□ 0.65
Six2Q62232 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Six2Q62232 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Six2Q62232 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Six2Q62232 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Six2Q62232 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Six2Q62232 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.11■□□□□ 0.65
Six2Q62232 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.11■□□□□ 0.65
Six2Q62232 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Six2Q62232 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.11■□□□□ 0.65
Six2Q62232 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.11■□□□□ 0.65
Six2Q62232 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.11■□□□□ 0.65
Six2Q62232 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Six2Q62232 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Six2Q62232 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Six2Q62232 Gm5408-201ENSMUST00000197998 747 ntBASIC19.11■□□□□ 0.65
Six2Q62232 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.11■□□□□ 0.65
Six2Q62232 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Six2Q62232 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Six2Q62232 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Six2Q62232 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Six2Q62232 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Six2Q62232 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Six2Q62232 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Six2Q62232 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Six2Q62232 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Six2Q62232 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Six2Q62232 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Six2Q62232 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Six2Q62232 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Six2Q62232 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Six2Q62232 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Six2Q62232 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Six2Q62232 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Six2Q62232 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Six2Q62232 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.1■□□□□ 0.65
Six2Q62232 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Six2Q62232 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Six2Q62232 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Six2Q62232 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Six2Q62232 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.09■□□□□ 0.65
Six2Q62232 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Six2Q62232 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.09■□□□□ 0.65
Six2Q62232 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Six2Q62232 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms