Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Scn9aQ62205 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Scn9aQ62205 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Scn9aQ62205 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Scn9aQ62205 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC21.27■■□□□ 1
Scn9aQ62205 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Scn9aQ62205 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Scn9aQ62205 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Scn9aQ62205 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Scn9aQ62205 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Scn9aQ62205 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scn9aQ62205 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Scn9aQ62205 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scn9aQ62205 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scn9aQ62205 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Scn9aQ62205 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC21.25■□□□□ 0.99
Scn9aQ62205 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC21.25■□□□□ 0.99
Scn9aQ62205 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Scn9aQ62205 Gm37820-201ENSMUST00000194021 2147 ntBASIC21.25■□□□□ 0.99
Scn9aQ62205 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scn9aQ62205 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scn9aQ62205 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scn9aQ62205 Gm17808-201ENSMUST00000200859 894 ntBASIC21.24■□□□□ 0.99
Scn9aQ62205 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scn9aQ62205 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scn9aQ62205 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scn9aQ62205 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Scn9aQ62205 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Scn9aQ62205 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scn9aQ62205 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Scn9aQ62205 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scn9aQ62205 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Scn9aQ62205 Gm13474-201ENSMUST00000122466 815 ntBASIC21.23■□□□□ 0.99
Scn9aQ62205 Gm21559-201ENSMUST00000220638 855 ntBASIC21.23■□□□□ 0.99
Scn9aQ62205 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scn9aQ62205 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scn9aQ62205 Gm8587-201ENSMUST00000076538 843 ntBASIC21.23■□□□□ 0.99
Scn9aQ62205 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Scn9aQ62205 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scn9aQ62205 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scn9aQ62205 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Scn9aQ62205 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scn9aQ62205 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Scn9aQ62205 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scn9aQ62205 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC21.23■□□□□ 0.99
Scn9aQ62205 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC21.23■□□□□ 0.99
Scn9aQ62205 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scn9aQ62205 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Scn9aQ62205 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Scn9aQ62205 AC108858.1-201ENSMUST00000228461 1498 ntBASIC21.22■□□□□ 0.99
Scn9aQ62205 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.22■□□□□ 0.99
Scn9aQ62205 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
Scn9aQ62205 Gm7791-201ENSMUST00000219066 539 ntBASIC21.22■□□□□ 0.99
Scn9aQ62205 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
Scn9aQ62205 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scn9aQ62205 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scn9aQ62205 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC21.22■□□□□ 0.99
Scn9aQ62205 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scn9aQ62205 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scn9aQ62205 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.22■□□□□ 0.99
Scn9aQ62205 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC21.21■□□□□ 0.99
Scn9aQ62205 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Scn9aQ62205 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC21.21■□□□□ 0.99
Scn9aQ62205 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scn9aQ62205 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Scn9aQ62205 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scn9aQ62205 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scn9aQ62205 BC021767-201ENSMUST00000126387 1716 ntBASIC21.21■□□□□ 0.99
Scn9aQ62205 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.21■□□□□ 0.99
Scn9aQ62205 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scn9aQ62205 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scn9aQ62205 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scn9aQ62205 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Scn9aQ62205 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Scn9aQ62205 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scn9aQ62205 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC21.21■□□□□ 0.99
Scn9aQ62205 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Scn9aQ62205 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Scn9aQ62205 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Scn9aQ62205 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Scn9aQ62205 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scn9aQ62205 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scn9aQ62205 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Scn9aQ62205 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Scn9aQ62205 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scn9aQ62205 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.2■□□□□ 0.98
Scn9aQ62205 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scn9aQ62205 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Scn9aQ62205 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scn9aQ62205 Gm27357-201ENSMUST00000183754 135 ntBASIC21.19■□□□□ 0.98
Scn9aQ62205 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC21.19■□□□□ 0.98
Scn9aQ62205 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scn9aQ62205 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scn9aQ62205 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Scn9aQ62205 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scn9aQ62205 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC21.19■□□□□ 0.98
Scn9aQ62205 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Scn9aQ62205 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scn9aQ62205 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scn9aQ62205 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms