Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rai1Q61818 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Rai1Q61818 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Rai1Q61818 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rai1Q61818 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rai1Q61818 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.37■□□□□ 0.37
Rai1Q61818 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rai1Q61818 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rai1Q61818 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.36■□□□□ 0.37
Rai1Q61818 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rai1Q61818 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.36■□□□□ 0.37
Rai1Q61818 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rai1Q61818 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rai1Q61818 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rai1Q61818 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rai1Q61818 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rai1Q61818 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Rai1Q61818 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.36■□□□□ 0.37
Rai1Q61818 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.36■□□□□ 0.37
Rai1Q61818 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rai1Q61818 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rai1Q61818 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rai1Q61818 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rai1Q61818 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rai1Q61818 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rai1Q61818 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rai1Q61818 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rai1Q61818 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rai1Q61818 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Rai1Q61818 Gm10418-201ENSMUST00000100943 576 ntBASIC17.35■□□□□ 0.37
Rai1Q61818 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rai1Q61818 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.35■□□□□ 0.37
Rai1Q61818 Gm7370-201ENSMUST00000219471 767 ntBASIC17.35■□□□□ 0.37
Rai1Q61818 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rai1Q61818 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rai1Q61818 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Rai1Q61818 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rai1Q61818 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rai1Q61818 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Rai1Q61818 Ank2-226ENSMUST00000189368 339 ntBASIC17.35■□□□□ 0.37
Rai1Q61818 Gm17971-201ENSMUST00000190239 806 ntBASIC17.35■□□□□ 0.37
Rai1Q61818 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rai1Q61818 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rai1Q61818 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rai1Q61818 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Rai1Q61818 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rai1Q61818 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rai1Q61818 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rai1Q61818 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rai1Q61818 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rai1Q61818 Gm7284-201ENSMUST00000131667 944 ntBASIC17.34■□□□□ 0.37
Rai1Q61818 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rai1Q61818 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rai1Q61818 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.34■□□□□ 0.37
Rai1Q61818 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.34■□□□□ 0.37
Rai1Q61818 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rai1Q61818 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rai1Q61818 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.34■□□□□ 0.37
Rai1Q61818 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rai1Q61818 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Rai1Q61818 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rai1Q61818 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Rai1Q61818 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rai1Q61818 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rai1Q61818 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rai1Q61818 Gm9103-201ENSMUST00000119371 405 ntBASIC17.33■□□□□ 0.37
Rai1Q61818 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rai1Q61818 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rai1Q61818 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.33■□□□□ 0.37
Rai1Q61818 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rai1Q61818 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.33■□□□□ 0.37
Rai1Q61818 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rai1Q61818 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Rai1Q61818 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.33■□□□□ 0.36
Rai1Q61818 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rai1Q61818 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Rai1Q61818 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.33■□□□□ 0.36
Rai1Q61818 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rai1Q61818 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.32■□□□□ 0.36
Rai1Q61818 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rai1Q61818 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rai1Q61818 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rai1Q61818 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rai1Q61818 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Rai1Q61818 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rai1Q61818 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Rai1Q61818 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rai1Q61818 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rai1Q61818 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rai1Q61818 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rai1Q61818 Gm22697-201ENSMUST00000175194 63 ntBASIC17.31■□□□□ 0.36
Rai1Q61818 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.31■□□□□ 0.36
Rai1Q61818 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.31■□□□□ 0.36
Rai1Q61818 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.31■□□□□ 0.36
Rai1Q61818 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rai1Q61818 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rai1Q61818 Gm14859-201ENSMUST00000117752 357 ntBASIC17.31■□□□□ 0.36
Rai1Q61818 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Rai1Q61818 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.31■□□□□ 0.36
Rai1Q61818 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms