Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.69■□□□□ 0.58
Smarcd1Q61466 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.69■□□□□ 0.58
Smarcd1Q61466 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcd1Q61466 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcd1Q61466 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.69■□□□□ 0.58
Smarcd1Q61466 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Smarcd1Q61466 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcd1Q61466 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.69■□□□□ 0.58
Smarcd1Q61466 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcd1Q61466 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcd1Q61466 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcd1Q61466 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcd1Q61466 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Smarcd1Q61466 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Smarcd1Q61466 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcd1Q61466 Gm12382-201ENSMUST00000122005 922 ntBASIC18.68■□□□□ 0.58
Smarcd1Q61466 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.68■□□□□ 0.58
Smarcd1Q61466 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.68■□□□□ 0.58
Smarcd1Q61466 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcd1Q61466 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Smarcd1Q61466 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcd1Q61466 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcd1Q61466 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Smarcd1Q61466 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.67■□□□□ 0.58
Smarcd1Q61466 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcd1Q61466 Mir1199-201ENSMUST00000117015 119 ntBASIC18.67■□□□□ 0.58
Smarcd1Q61466 Gm37292-201ENSMUST00000192062 758 ntBASIC18.67■□□□□ 0.58
Smarcd1Q61466 Gm10252-201ENSMUST00000209541 832 ntBASIC18.67■□□□□ 0.58
Smarcd1Q61466 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.67■□□□□ 0.58
Smarcd1Q61466 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcd1Q61466 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcd1Q61466 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcd1Q61466 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcd1Q61466 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcd1Q61466 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcd1Q61466 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcd1Q61466 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcd1Q61466 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcd1Q61466 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcd1Q61466 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcd1Q61466 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcd1Q61466 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcd1Q61466 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcd1Q61466 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Smarcd1Q61466 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcd1Q61466 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Smarcd1Q61466 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Smarcd1Q61466 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Smarcd1Q61466 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Smarcd1Q61466 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcd1Q61466 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcd1Q61466 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcd1Q61466 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.66■□□□□ 0.58
Smarcd1Q61466 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcd1Q61466 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcd1Q61466 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcd1Q61466 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcd1Q61466 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcd1Q61466 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.65■□□□□ 0.58
Smarcd1Q61466 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Smarcd1Q61466 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Smarcd1Q61466 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcd1Q61466 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcd1Q61466 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcd1Q61466 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcd1Q61466 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcd1Q61466 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.65■□□□□ 0.58
Smarcd1Q61466 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcd1Q61466 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.64■□□□□ 0.58
Smarcd1Q61466 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smarcd1Q61466 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smarcd1Q61466 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smarcd1Q61466 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smarcd1Q61466 Gm11643-201ENSMUST00000119578 864 ntBASIC18.64■□□□□ 0.57
Smarcd1Q61466 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.64■□□□□ 0.57
Smarcd1Q61466 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.64■□□□□ 0.57
Smarcd1Q61466 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcd1Q61466 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Smarcd1Q61466 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.64■□□□□ 0.57
Smarcd1Q61466 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Smarcd1Q61466 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Smarcd1Q61466 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcd1Q61466 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcd1Q61466 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcd1Q61466 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcd1Q61466 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcd1Q61466 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcd1Q61466 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcd1Q61466 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.63■□□□□ 0.57
Smarcd1Q61466 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcd1Q61466 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Smarcd1Q61466 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.63■□□□□ 0.57
Smarcd1Q61466 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.63■□□□□ 0.57
Smarcd1Q61466 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcd1Q61466 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcd1Q61466 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcd1Q61466 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcd1Q61466 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcd1Q61466 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.63■□□□□ 0.57
Smarcd1Q61466 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms