Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scnn1aQ61180 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scnn1aQ61180 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scnn1aQ61180 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scnn1aQ61180 Gm9987-201ENSMUST00000069768 567 ntBASIC20.69■□□□□ 0.9
Scnn1aQ61180 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Scnn1aQ61180 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Scnn1aQ61180 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scnn1aQ61180 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.68■□□□□ 0.9
Scnn1aQ61180 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scnn1aQ61180 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Scnn1aQ61180 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scnn1aQ61180 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scnn1aQ61180 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scnn1aQ61180 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scnn1aQ61180 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scnn1aQ61180 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.68■□□□□ 0.9
Scnn1aQ61180 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.68■□□□□ 0.9
Scnn1aQ61180 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scnn1aQ61180 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scnn1aQ61180 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scnn1aQ61180 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Scnn1aQ61180 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scnn1aQ61180 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Scnn1aQ61180 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Scnn1aQ61180 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.67■□□□□ 0.9
Scnn1aQ61180 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scnn1aQ61180 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scnn1aQ61180 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Scnn1aQ61180 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.67■□□□□ 0.9
Scnn1aQ61180 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Scnn1aQ61180 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scnn1aQ61180 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scnn1aQ61180 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scnn1aQ61180 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scnn1aQ61180 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scnn1aQ61180 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Scnn1aQ61180 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Scnn1aQ61180 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.66■□□□□ 0.9
Scnn1aQ61180 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Scnn1aQ61180 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.66■□□□□ 0.9
Scnn1aQ61180 Gm11539-201ENSMUST00000119837 557 ntBASIC20.66■□□□□ 0.9
Scnn1aQ61180 Gm13436-201ENSMUST00000120418 567 ntBASIC20.66■□□□□ 0.9
Scnn1aQ61180 Gm13559-201ENSMUST00000120476 863 ntBASIC20.66■□□□□ 0.9
Scnn1aQ61180 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.66■□□□□ 0.9
Scnn1aQ61180 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scnn1aQ61180 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scnn1aQ61180 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Scnn1aQ61180 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scnn1aQ61180 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Scnn1aQ61180 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scnn1aQ61180 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scnn1aQ61180 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.66■□□□□ 0.9
Scnn1aQ61180 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scnn1aQ61180 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Scnn1aQ61180 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scnn1aQ61180 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scnn1aQ61180 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scnn1aQ61180 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scnn1aQ61180 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scnn1aQ61180 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scnn1aQ61180 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Scnn1aQ61180 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Scnn1aQ61180 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Scnn1aQ61180 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Scnn1aQ61180 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Scnn1aQ61180 Gm13401-201ENSMUST00000117074 291 ntBASIC20.65■□□□□ 0.9
Scnn1aQ61180 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Scnn1aQ61180 Gm4974-201ENSMUST00000209974 875 ntBASIC20.65■□□□□ 0.9
Scnn1aQ61180 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scnn1aQ61180 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scnn1aQ61180 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.65■□□□□ 0.9
Scnn1aQ61180 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.65■□□□□ 0.9
Scnn1aQ61180 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scnn1aQ61180 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Scnn1aQ61180 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.64■□□□□ 0.89
Scnn1aQ61180 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.64■□□□□ 0.89
Scnn1aQ61180 Gm29791-202ENSMUST00000207888 369 ntBASIC20.64■□□□□ 0.89
Scnn1aQ61180 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Scnn1aQ61180 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scnn1aQ61180 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scnn1aQ61180 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scnn1aQ61180 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scnn1aQ61180 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scnn1aQ61180 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scnn1aQ61180 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scnn1aQ61180 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scnn1aQ61180 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scnn1aQ61180 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Scnn1aQ61180 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scnn1aQ61180 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scnn1aQ61180 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scnn1aQ61180 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.63■□□□□ 0.89
Scnn1aQ61180 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.63■□□□□ 0.89
Scnn1aQ61180 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Scnn1aQ61180 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.63■□□□□ 0.89
Scnn1aQ61180 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scnn1aQ61180 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Scnn1aQ61180 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scnn1aQ61180 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms