Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Foxf1Q61080 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.02□□□□□ -0.01
Foxf1Q61080 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Foxf1Q61080 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Foxf1Q61080 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Foxf1Q61080 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Foxf1Q61080 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.01□□□□□ -0.01
Foxf1Q61080 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Foxf1Q61080 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Foxf1Q61080 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Foxf1Q61080 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Foxf1Q61080 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.01□□□□□ -0.01
Foxf1Q61080 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Foxf1Q61080 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Foxf1Q61080 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Foxf1Q61080 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Foxf1Q61080 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Foxf1Q61080 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Foxf1Q61080 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Foxf1Q61080 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Foxf1Q61080 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Foxf1Q61080 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15□□□□□ -0.01
Foxf1Q61080 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Foxf1Q61080 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Foxf1Q61080 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Foxf1Q61080 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15□□□□□ -0.01
Foxf1Q61080 Gm26524-201ENSMUST00000192339 390 ntBASIC15□□□□□ -0.01
Foxf1Q61080 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15□□□□□ -0.01
Foxf1Q61080 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15□□□□□ -0.01
Foxf1Q61080 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15□□□□□ -0.01
Foxf1Q61080 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Foxf1Q61080 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15□□□□□ -0.01
Foxf1Q61080 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Foxf1Q61080 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Foxf1Q61080 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15□□□□□ -0.01
Foxf1Q61080 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Foxf1Q61080 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15□□□□□ -0.01
Foxf1Q61080 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Foxf1Q61080 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Foxf1Q61080 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Foxf1Q61080 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Foxf1Q61080 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Foxf1Q61080 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Foxf1Q61080 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Foxf1Q61080 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.99□□□□□ -0.01
Foxf1Q61080 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Foxf1Q61080 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.99□□□□□ -0.01
Foxf1Q61080 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Foxf1Q61080 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Foxf1Q61080 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Foxf1Q61080 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Foxf1Q61080 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Foxf1Q61080 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Foxf1Q61080 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Foxf1Q61080 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Foxf1Q61080 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Foxf1Q61080 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.99□□□□□ -0.01
Foxf1Q61080 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Foxf1Q61080 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Foxf1Q61080 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Foxf1Q61080 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Foxf1Q61080 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Foxf1Q61080 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Foxf1Q61080 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Foxf1Q61080 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Foxf1Q61080 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Foxf1Q61080 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Foxf1Q61080 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Foxf1Q61080 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Foxf1Q61080 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Foxf1Q61080 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.98□□□□□ -0.01
Foxf1Q61080 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Foxf1Q61080 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Foxf1Q61080 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.98□□□□□ -0.01
Foxf1Q61080 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Foxf1Q61080 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Foxf1Q61080 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Foxf1Q61080 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Foxf1Q61080 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.97□□□□□ -0.01
Foxf1Q61080 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Foxf1Q61080 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Foxf1Q61080 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Foxf1Q61080 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Foxf1Q61080 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Foxf1Q61080 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.97□□□□□ -0.01
Foxf1Q61080 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Foxf1Q61080 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.97□□□□□ -0.01
Foxf1Q61080 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Foxf1Q61080 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Foxf1Q61080 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC14.97□□□□□ -0.01
Foxf1Q61080 Rab3c-203ENSMUST00000224180 967 ntBASIC14.97□□□□□ -0.01
Foxf1Q61080 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Foxf1Q61080 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Foxf1Q61080 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Foxf1Q61080 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Foxf1Q61080 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Foxf1Q61080 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Foxf1Q61080 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Foxf1Q61080 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Foxf1Q61080 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms