Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sim2Q61079 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sim2Q61079 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sim2Q61079 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sim2Q61079 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sim2Q61079 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sim2Q61079 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sim2Q61079 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sim2Q61079 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Sim2Q61079 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sim2Q61079 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Sim2Q61079 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sim2Q61079 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sim2Q61079 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sim2Q61079 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sim2Q61079 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sim2Q61079 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.5■□□□□ 0.39
Sim2Q61079 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Sim2Q61079 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Sim2Q61079 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sim2Q61079 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Sim2Q61079 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sim2Q61079 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sim2Q61079 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sim2Q61079 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Sim2Q61079 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.5■□□□□ 0.39
Sim2Q61079 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sim2Q61079 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sim2Q61079 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Sim2Q61079 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Sim2Q61079 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sim2Q61079 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sim2Q61079 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sim2Q61079 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sim2Q61079 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sim2Q61079 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sim2Q61079 Gm16061-201ENSMUST00000122167 857 ntBASIC17.49■□□□□ 0.39
Sim2Q61079 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sim2Q61079 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.49■□□□□ 0.39
Sim2Q61079 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.49■□□□□ 0.39
Sim2Q61079 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sim2Q61079 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sim2Q61079 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sim2Q61079 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Sim2Q61079 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sim2Q61079 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sim2Q61079 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Sim2Q61079 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sim2Q61079 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sim2Q61079 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sim2Q61079 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Sim2Q61079 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sim2Q61079 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.48■□□□□ 0.39
Sim2Q61079 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.48■□□□□ 0.39
Sim2Q61079 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sim2Q61079 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Sim2Q61079 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sim2Q61079 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.48■□□□□ 0.39
Sim2Q61079 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sim2Q61079 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sim2Q61079 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sim2Q61079 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sim2Q61079 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sim2Q61079 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sim2Q61079 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sim2Q61079 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Sim2Q61079 Mir2861-201ENSMUST00000175539 82 ntBASIC17.47■□□□□ 0.39
Sim2Q61079 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.47■□□□□ 0.39
Sim2Q61079 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Sim2Q61079 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sim2Q61079 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Sim2Q61079 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sim2Q61079 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sim2Q61079 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sim2Q61079 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sim2Q61079 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sim2Q61079 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sim2Q61079 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sim2Q61079 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sim2Q61079 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sim2Q61079 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sim2Q61079 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sim2Q61079 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.46■□□□□ 0.39
Sim2Q61079 Gm28033-201ENSMUST00000184224 96 ntBASIC17.46■□□□□ 0.39
Sim2Q61079 Gm17807-201ENSMUST00000186869 298 ntBASIC17.46■□□□□ 0.39
Sim2Q61079 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sim2Q61079 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sim2Q61079 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sim2Q61079 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
Sim2Q61079 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sim2Q61079 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sim2Q61079 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.45■□□□□ 0.38
Sim2Q61079 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sim2Q61079 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.45■□□□□ 0.38
Sim2Q61079 Gm27389-201ENSMUST00000183622 195 ntBASIC17.45■□□□□ 0.38
Sim2Q61079 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sim2Q61079 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sim2Q61079 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sim2Q61079 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sim2Q61079 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms