Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scarb1Q61009 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scarb1Q61009 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.14■□□□□ 0.01
Scarb1Q61009 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Scarb1Q61009 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scarb1Q61009 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.14■□□□□ 0.01
Scarb1Q61009 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scarb1Q61009 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scarb1Q61009 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scarb1Q61009 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Scarb1Q61009 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scarb1Q61009 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scarb1Q61009 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scarb1Q61009 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Scarb1Q61009 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scarb1Q61009 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scarb1Q61009 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Scarb1Q61009 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scarb1Q61009 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Scarb1Q61009 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scarb1Q61009 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scarb1Q61009 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Scarb1Q61009 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Scarb1Q61009 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Scarb1Q61009 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scarb1Q61009 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scarb1Q61009 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scarb1Q61009 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scarb1Q61009 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scarb1Q61009 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scarb1Q61009 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scarb1Q61009 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Scarb1Q61009 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.12■□□□□ 0.01
Scarb1Q61009 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scarb1Q61009 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
Scarb1Q61009 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scarb1Q61009 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scarb1Q61009 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.12■□□□□ 0.01
Scarb1Q61009 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scarb1Q61009 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Scarb1Q61009 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Scarb1Q61009 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scarb1Q61009 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scarb1Q61009 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scarb1Q61009 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scarb1Q61009 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Scarb1Q61009 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scarb1Q61009 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scarb1Q61009 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC15.11■□□□□ 0.01
Scarb1Q61009 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scarb1Q61009 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scarb1Q61009 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC15.11■□□□□ 0.01
Scarb1Q61009 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scarb1Q61009 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scarb1Q61009 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scarb1Q61009 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Scarb1Q61009 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scarb1Q61009 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scarb1Q61009 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.1■□□□□ 0.01
Scarb1Q61009 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Scarb1Q61009 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scarb1Q61009 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.1■□□□□ 0.01
Scarb1Q61009 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Scarb1Q61009 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Scarb1Q61009 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scarb1Q61009 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scarb1Q61009 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scarb1Q61009 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scarb1Q61009 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scarb1Q61009 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scarb1Q61009 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scarb1Q61009 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scarb1Q61009 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scarb1Q61009 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scarb1Q61009 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Scarb1Q61009 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scarb1Q61009 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scarb1Q61009 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scarb1Q61009 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.09■□□□□ 0.01
Scarb1Q61009 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.09■□□□□ 0.01
Scarb1Q61009 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scarb1Q61009 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scarb1Q61009 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC15.09■□□□□ 0.01
Scarb1Q61009 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Scarb1Q61009 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scarb1Q61009 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scarb1Q61009 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scarb1Q61009 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scarb1Q61009 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scarb1Q61009 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.09■□□□□ 0.01
Scarb1Q61009 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Scarb1Q61009 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Scarb1Q61009 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Scarb1Q61009 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Scarb1Q61009 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Scarb1Q61009 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.08■□□□□ 0
Scarb1Q61009 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.08■□□□□ 0
Scarb1Q61009 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.08■□□□□ 0
Scarb1Q61009 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Scarb1Q61009 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms