Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col12a1Q60847 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col12a1Q60847 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Col12a1Q60847 Mir2861-201ENSMUST00000175539 82 ntBASIC17.83■□□□□ 0.44
Col12a1Q60847 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.83■□□□□ 0.44
Col12a1Q60847 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.82■□□□□ 0.44
Col12a1Q60847 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.82■□□□□ 0.44
Col12a1Q60847 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.82■□□□□ 0.44
Col12a1Q60847 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col12a1Q60847 Gm10566-201ENSMUST00000086739 996 ntBASIC17.82■□□□□ 0.44
Col12a1Q60847 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Col12a1Q60847 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col12a1Q60847 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col12a1Q60847 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col12a1Q60847 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col12a1Q60847 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.82■□□□□ 0.44
Col12a1Q60847 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Col12a1Q60847 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
Col12a1Q60847 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
Col12a1Q60847 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Col12a1Q60847 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col12a1Q60847 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col12a1Q60847 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col12a1Q60847 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col12a1Q60847 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col12a1Q60847 Gm15794-201ENSMUST00000120182 631 ntBASIC17.81■□□□□ 0.44
Col12a1Q60847 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.81■□□□□ 0.44
Col12a1Q60847 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col12a1Q60847 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col12a1Q60847 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col12a1Q60847 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col12a1Q60847 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col12a1Q60847 Gm18206-201ENSMUST00000207027 926 ntBASIC17.81■□□□□ 0.44
Col12a1Q60847 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
Col12a1Q60847 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col12a1Q60847 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.8■□□□□ 0.44
Col12a1Q60847 Gm7063-201ENSMUST00000186840 981 ntBASIC17.8■□□□□ 0.44
Col12a1Q60847 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.8■□□□□ 0.44
Col12a1Q60847 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col12a1Q60847 Gm13884-201ENSMUST00000118103 829 ntBASIC17.8■□□□□ 0.44
Col12a1Q60847 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col12a1Q60847 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.8■□□□□ 0.44
Col12a1Q60847 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col12a1Q60847 Mir1668-201ENSMUST00000184114 107 ntBASIC17.79■□□□□ 0.44
Col12a1Q60847 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col12a1Q60847 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col12a1Q60847 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col12a1Q60847 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col12a1Q60847 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col12a1Q60847 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Col12a1Q60847 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col12a1Q60847 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.79■□□□□ 0.44
Col12a1Q60847 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col12a1Q60847 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.79■□□□□ 0.44
Col12a1Q60847 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col12a1Q60847 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col12a1Q60847 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col12a1Q60847 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Col12a1Q60847 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col12a1Q60847 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col12a1Q60847 Golph3-205ENSMUST00000228671 2842 ntBASIC17.78■□□□□ 0.44
Col12a1Q60847 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.78■□□□□ 0.44
Col12a1Q60847 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.78■□□□□ 0.44
Col12a1Q60847 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col12a1Q60847 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col12a1Q60847 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col12a1Q60847 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col12a1Q60847 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col12a1Q60847 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.78■□□□□ 0.44
Col12a1Q60847 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col12a1Q60847 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Col12a1Q60847 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Col12a1Q60847 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Col12a1Q60847 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col12a1Q60847 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col12a1Q60847 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col12a1Q60847 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col12a1Q60847 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Col12a1Q60847 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.77■□□□□ 0.44
Col12a1Q60847 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col12a1Q60847 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col12a1Q60847 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.77■□□□□ 0.43
Col12a1Q60847 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col12a1Q60847 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Col12a1Q60847 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Col12a1Q60847 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Col12a1Q60847 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col12a1Q60847 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Col12a1Q60847 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col12a1Q60847 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col12a1Q60847 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col12a1Q60847 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col12a1Q60847 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Col12a1Q60847 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col12a1Q60847 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Col12a1Q60847 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col12a1Q60847 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col12a1Q60847 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col12a1Q60847 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col12a1Q60847 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms