Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prdm1Q60636 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Prdm1Q60636 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prdm1Q60636 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prdm1Q60636 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prdm1Q60636 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prdm1Q60636 Gm5643-201ENSMUST00000117081 966 ntBASIC20.94■□□□□ 0.94
Prdm1Q60636 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.94■□□□□ 0.94
Prdm1Q60636 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prdm1Q60636 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Prdm1Q60636 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.94■□□□□ 0.94
Prdm1Q60636 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.94■□□□□ 0.94
Prdm1Q60636 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prdm1Q60636 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.94■□□□□ 0.94
Prdm1Q60636 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.94■□□□□ 0.94
Prdm1Q60636 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Prdm1Q60636 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prdm1Q60636 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prdm1Q60636 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.93■□□□□ 0.94
Prdm1Q60636 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prdm1Q60636 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prdm1Q60636 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prdm1Q60636 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prdm1Q60636 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prdm1Q60636 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prdm1Q60636 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.93■□□□□ 0.94
Prdm1Q60636 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
Prdm1Q60636 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.93■□□□□ 0.94
Prdm1Q60636 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prdm1Q60636 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Prdm1Q60636 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Prdm1Q60636 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prdm1Q60636 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Prdm1Q60636 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.92■□□□□ 0.94
Prdm1Q60636 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prdm1Q60636 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prdm1Q60636 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.92■□□□□ 0.94
Prdm1Q60636 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prdm1Q60636 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prdm1Q60636 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Prdm1Q60636 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Prdm1Q60636 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
Prdm1Q60636 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prdm1Q60636 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.91■□□□□ 0.94
Prdm1Q60636 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Prdm1Q60636 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.91■□□□□ 0.94
Prdm1Q60636 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prdm1Q60636 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Prdm1Q60636 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prdm1Q60636 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Prdm1Q60636 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.91■□□□□ 0.94
Prdm1Q60636 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prdm1Q60636 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Prdm1Q60636 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.9■□□□□ 0.94
Prdm1Q60636 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prdm1Q60636 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.9■□□□□ 0.94
Prdm1Q60636 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Prdm1Q60636 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Prdm1Q60636 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prdm1Q60636 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.9■□□□□ 0.94
Prdm1Q60636 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Prdm1Q60636 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Prdm1Q60636 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prdm1Q60636 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.9■□□□□ 0.94
Prdm1Q60636 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.9■□□□□ 0.94
Prdm1Q60636 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prdm1Q60636 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Prdm1Q60636 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Prdm1Q60636 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Prdm1Q60636 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Prdm1Q60636 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Prdm1Q60636 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Prdm1Q60636 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prdm1Q60636 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prdm1Q60636 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prdm1Q60636 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Prdm1Q60636 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Prdm1Q60636 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Prdm1Q60636 Gm10698-201ENSMUST00000182663 604 ntBASIC20.89■□□□□ 0.93
Prdm1Q60636 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.89■□□□□ 0.93
Prdm1Q60636 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prdm1Q60636 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prdm1Q60636 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Prdm1Q60636 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Prdm1Q60636 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prdm1Q60636 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.88■□□□□ 0.93
Prdm1Q60636 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prdm1Q60636 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.88■□□□□ 0.93
Prdm1Q60636 Mir2861-201ENSMUST00000175539 82 ntBASIC20.88■□□□□ 0.93
Prdm1Q60636 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prdm1Q60636 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
Prdm1Q60636 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prdm1Q60636 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prdm1Q60636 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Prdm1Q60636 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prdm1Q60636 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Prdm1Q60636 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prdm1Q60636 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prdm1Q60636 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.87■□□□□ 0.93
Prdm1Q60636 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms