Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Atp13a4Q5XF90 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Atp13a4Q5XF90 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atp13a4Q5XF90 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atp13a4Q5XF90 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.4■□□□□ 0.7
Atp13a4Q5XF90 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atp13a4Q5XF90 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atp13a4Q5XF90 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Atp13a4Q5XF90 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atp13a4Q5XF90 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atp13a4Q5XF90 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Atp13a4Q5XF90 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atp13a4Q5XF90 Gm27275-201ENSMUST00000184318 272 ntBASIC19.39■□□□□ 0.69
Atp13a4Q5XF90 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atp13a4Q5XF90 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Atp13a4Q5XF90 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.39■□□□□ 0.69
Atp13a4Q5XF90 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.39■□□□□ 0.69
Atp13a4Q5XF90 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atp13a4Q5XF90 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atp13a4Q5XF90 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atp13a4Q5XF90 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atp13a4Q5XF90 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atp13a4Q5XF90 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.38■□□□□ 0.69
Atp13a4Q5XF90 Gm11249-201ENSMUST00000117071 859 ntBASIC19.38■□□□□ 0.69
Atp13a4Q5XF90 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atp13a4Q5XF90 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atp13a4Q5XF90 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atp13a4Q5XF90 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Atp13a4Q5XF90 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Atp13a4Q5XF90 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Atp13a4Q5XF90 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atp13a4Q5XF90 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atp13a4Q5XF90 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Atp13a4Q5XF90 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Atp13a4Q5XF90 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atp13a4Q5XF90 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atp13a4Q5XF90 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.37■□□□□ 0.69
Atp13a4Q5XF90 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.37■□□□□ 0.69
Atp13a4Q5XF90 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Atp13a4Q5XF90 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.37■□□□□ 0.69
Atp13a4Q5XF90 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atp13a4Q5XF90 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atp13a4Q5XF90 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atp13a4Q5XF90 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.37■□□□□ 0.69
Atp13a4Q5XF90 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atp13a4Q5XF90 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atp13a4Q5XF90 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
Atp13a4Q5XF90 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atp13a4Q5XF90 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Atp13a4Q5XF90 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atp13a4Q5XF90 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.36■□□□□ 0.69
Atp13a4Q5XF90 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Atp13a4Q5XF90 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atp13a4Q5XF90 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atp13a4Q5XF90 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Atp13a4Q5XF90 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atp13a4Q5XF90 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atp13a4Q5XF90 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atp13a4Q5XF90 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Atp13a4Q5XF90 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Atp13a4Q5XF90 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atp13a4Q5XF90 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Atp13a4Q5XF90 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.35■□□□□ 0.69
Atp13a4Q5XF90 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atp13a4Q5XF90 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Atp13a4Q5XF90 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atp13a4Q5XF90 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atp13a4Q5XF90 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atp13a4Q5XF90 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atp13a4Q5XF90 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atp13a4Q5XF90 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Atp13a4Q5XF90 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Atp13a4Q5XF90 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Atp13a4Q5XF90 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atp13a4Q5XF90 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.34■□□□□ 0.69
Atp13a4Q5XF90 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atp13a4Q5XF90 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atp13a4Q5XF90 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Atp13a4Q5XF90 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.34■□□□□ 0.69
Atp13a4Q5XF90 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.34■□□□□ 0.69
Atp13a4Q5XF90 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atp13a4Q5XF90 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Atp13a4Q5XF90 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atp13a4Q5XF90 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Atp13a4Q5XF90 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.33■□□□□ 0.69
Atp13a4Q5XF90 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Atp13a4Q5XF90 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Atp13a4Q5XF90 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.33■□□□□ 0.69
Atp13a4Q5XF90 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Atp13a4Q5XF90 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.33■□□□□ 0.69
Atp13a4Q5XF90 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Atp13a4Q5XF90 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Atp13a4Q5XF90 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Atp13a4Q5XF90 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Atp13a4Q5XF90 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Atp13a4Q5XF90 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.33■□□□□ 0.68
Atp13a4Q5XF90 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Atp13a4Q5XF90 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.33■□□□□ 0.68
Atp13a4Q5XF90 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Atp13a4Q5XF90 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms