Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ubr3Q5U430 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ubr3Q5U430 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ubr3Q5U430 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Ubr3Q5U430 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Ubr3Q5U430 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
Ubr3Q5U430 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ubr3Q5U430 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ubr3Q5U430 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC21.95■■□□□ 1.1
Ubr3Q5U430 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC21.95■■□□□ 1.1
Ubr3Q5U430 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Ubr3Q5U430 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ubr3Q5U430 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ubr3Q5U430 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ubr3Q5U430 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.95■■□□□ 1.1
Ubr3Q5U430 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ubr3Q5U430 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Ubr3Q5U430 Gm11860-201ENSMUST00000122346 1010 ntBASIC21.94■■□□□ 1.1
Ubr3Q5U430 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ubr3Q5U430 Gm34391-201ENSMUST00000203706 907 ntBASIC21.94■■□□□ 1.1
Ubr3Q5U430 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ubr3Q5U430 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.94■■□□□ 1.1
Ubr3Q5U430 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ubr3Q5U430 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Ubr3Q5U430 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ubr3Q5U430 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ubr3Q5U430 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ubr3Q5U430 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ubr3Q5U430 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ubr3Q5U430 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Ubr3Q5U430 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ubr3Q5U430 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC21.92■■□□□ 1.1
Ubr3Q5U430 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Ubr3Q5U430 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC21.92■■□□□ 1.1
Ubr3Q5U430 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ubr3Q5U430 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
Ubr3Q5U430 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Ubr3Q5U430 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ubr3Q5U430 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ubr3Q5U430 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ubr3Q5U430 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC21.92■■□□□ 1.1
Ubr3Q5U430 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ubr3Q5U430 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
Ubr3Q5U430 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ubr3Q5U430 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Ubr3Q5U430 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Ubr3Q5U430 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ubr3Q5U430 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Ubr3Q5U430 Gm24589-201ENSMUST00000116692 94 ntBASIC21.9■■□□□ 1.1
Ubr3Q5U430 Gm11355-201ENSMUST00000121120 306 ntBASIC21.9■■□□□ 1.1
Ubr3Q5U430 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ubr3Q5U430 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC21.9■■□□□ 1.1
Ubr3Q5U430 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ubr3Q5U430 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Ubr3Q5U430 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ubr3Q5U430 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ubr3Q5U430 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC21.9■■□□□ 1.1
Ubr3Q5U430 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ubr3Q5U430 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ubr3Q5U430 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.9■■□□□ 1.1
Ubr3Q5U430 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ubr3Q5U430 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ubr3Q5U430 Mzt1-203ENSMUST00000227948 952 ntBASIC21.9■■□□□ 1.1
Ubr3Q5U430 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ubr3Q5U430 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Ubr3Q5U430 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Ubr3Q5U430 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Ubr3Q5U430 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC21.89■■□□□ 1.09
Ubr3Q5U430 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Ubr3Q5U430 Gm18115-201ENSMUST00000221209 621 ntBASIC21.89■■□□□ 1.09
Ubr3Q5U430 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC21.89■■□□□ 1.09
Ubr3Q5U430 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ubr3Q5U430 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ubr3Q5U430 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ubr3Q5U430 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ubr3Q5U430 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ubr3Q5U430 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ubr3Q5U430 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ubr3Q5U430 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.88■■□□□ 1.09
Ubr3Q5U430 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
Ubr3Q5U430 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ubr3Q5U430 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ubr3Q5U430 Mir770-201ENSMUST00000103252 94 ntBASIC21.88■■□□□ 1.09
Ubr3Q5U430 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC21.88■■□□□ 1.09
Ubr3Q5U430 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Ubr3Q5U430 Spr-ps1-201ENSMUST00000089584 605 ntBASIC21.88■■□□□ 1.09
Ubr3Q5U430 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ubr3Q5U430 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Ubr3Q5U430 Gm37722-201ENSMUST00000193757 208 ntBASIC21.87■■□□□ 1.09
Ubr3Q5U430 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ubr3Q5U430 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ubr3Q5U430 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ubr3Q5U430 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ubr3Q5U430 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC21.86■■□□□ 1.09
Ubr3Q5U430 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ubr3Q5U430 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC21.86■■□□□ 1.09
Ubr3Q5U430 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ubr3Q5U430 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC21.86■■□□□ 1.09
Ubr3Q5U430 Mir3081-201ENSMUST00000175305 84 ntBASIC21.86■■□□□ 1.09
Ubr3Q5U430 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms