Protein–RNA interactions for Protein: Q5SUQ9

Ctc1, CST complex subunit CTC1, mousemouse

Predictions only

Length 1,212 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1Q5SUQ9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ctc1Q5SUQ9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ctc1Q5SUQ9 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.01■□□□□ 0.63
Ctc1Q5SUQ9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ctc1Q5SUQ9 Gm5643-201ENSMUST00000117081 966 ntBASIC19.01■□□□□ 0.63
Ctc1Q5SUQ9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Ctc1Q5SUQ9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ctc1Q5SUQ9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ctc1Q5SUQ9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ctc1Q5SUQ9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ctc1Q5SUQ9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Ctc1Q5SUQ9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ctc1Q5SUQ9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ctc1Q5SUQ9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Ctc1Q5SUQ9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Ctc1Q5SUQ9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19■□□□□ 0.63
Ctc1Q5SUQ9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ctc1Q5SUQ9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19■□□□□ 0.63
Ctc1Q5SUQ9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ctc1Q5SUQ9 Gm6576-201ENSMUST00000169678 883 ntBASIC19■□□□□ 0.63
Ctc1Q5SUQ9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ctc1Q5SUQ9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ctc1Q5SUQ9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ctc1Q5SUQ9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ctc1Q5SUQ9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ctc1Q5SUQ9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ctc1Q5SUQ9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Ctc1Q5SUQ9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ctc1Q5SUQ9 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.99■□□□□ 0.63
Ctc1Q5SUQ9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ctc1Q5SUQ9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ctc1Q5SUQ9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ctc1Q5SUQ9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.99■□□□□ 0.63
Ctc1Q5SUQ9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.99■□□□□ 0.63
Ctc1Q5SUQ9 Gm2559-201ENSMUST00000201323 363 ntBASIC18.99■□□□□ 0.63
Ctc1Q5SUQ9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ctc1Q5SUQ9 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Ctc1Q5SUQ9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.99■□□□□ 0.63
Ctc1Q5SUQ9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ctc1Q5SUQ9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ctc1Q5SUQ9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ctc1Q5SUQ9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.98■□□□□ 0.63
Ctc1Q5SUQ9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.98■□□□□ 0.63
Ctc1Q5SUQ9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ctc1Q5SUQ9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ctc1Q5SUQ9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ctc1Q5SUQ9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.98■□□□□ 0.63
Ctc1Q5SUQ9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.98■□□□□ 0.63
Ctc1Q5SUQ9 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.98■□□□□ 0.63
Ctc1Q5SUQ9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.98■□□□□ 0.63
Ctc1Q5SUQ9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ctc1Q5SUQ9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Ctc1Q5SUQ9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ctc1Q5SUQ9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ctc1Q5SUQ9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ctc1Q5SUQ9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ctc1Q5SUQ9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ctc1Q5SUQ9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Ctc1Q5SUQ9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ctc1Q5SUQ9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ctc1Q5SUQ9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ctc1Q5SUQ9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ctc1Q5SUQ9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.97■□□□□ 0.63
Ctc1Q5SUQ9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ctc1Q5SUQ9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ctc1Q5SUQ9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ctc1Q5SUQ9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Ctc1Q5SUQ9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ctc1Q5SUQ9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ctc1Q5SUQ9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ctc1Q5SUQ9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ctc1Q5SUQ9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ctc1Q5SUQ9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Ctc1Q5SUQ9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Ctc1Q5SUQ9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.96■□□□□ 0.63
Ctc1Q5SUQ9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
Ctc1Q5SUQ9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ctc1Q5SUQ9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Ctc1Q5SUQ9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.96■□□□□ 0.63
Ctc1Q5SUQ9 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.96■□□□□ 0.63
Ctc1Q5SUQ9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ctc1Q5SUQ9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.95■□□□□ 0.62
Ctc1Q5SUQ9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ctc1Q5SUQ9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ctc1Q5SUQ9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.95■□□□□ 0.62
Ctc1Q5SUQ9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Ctc1Q5SUQ9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.95■□□□□ 0.62
Ctc1Q5SUQ9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ctc1Q5SUQ9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ctc1Q5SUQ9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ctc1Q5SUQ9 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.95■□□□□ 0.62
Ctc1Q5SUQ9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ctc1Q5SUQ9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ctc1Q5SUQ9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Ctc1Q5SUQ9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ctc1Q5SUQ9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Ctc1Q5SUQ9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.94■□□□□ 0.62
Ctc1Q5SUQ9 Gm13836-201ENSMUST00000121159 501 ntBASIC18.94■□□□□ 0.62
Ctc1Q5SUQ9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.94■□□□□ 0.62
Ctc1Q5SUQ9 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms