Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav6d-4Q5R1I0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.07■□□□□ 0
Trav6d-4Q5R1I0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Trav6d-4Q5R1I0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6d-4Q5R1I0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav6d-4Q5R1I0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav6d-4Q5R1I0 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav6d-4Q5R1I0 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6d-4Q5R1I0 Mir6349-201ENSMUST00000184059 97 ntBASIC15.07■□□□□ 0
Trav6d-4Q5R1I0 Gm10252-201ENSMUST00000209541 832 ntBASIC15.07■□□□□ 0
Trav6d-4Q5R1I0 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.07■□□□□ 0
Trav6d-4Q5R1I0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6d-4Q5R1I0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6d-4Q5R1I0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6d-4Q5R1I0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6d-4Q5R1I0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.07■□□□□ 0
Trav6d-4Q5R1I0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6d-4Q5R1I0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6d-4Q5R1I0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Trav6d-4Q5R1I0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6d-4Q5R1I0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6d-4Q5R1I0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav6d-4Q5R1I0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6d-4Q5R1I0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6d-4Q5R1I0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav6d-4Q5R1I0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav6d-4Q5R1I0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav6d-4Q5R1I0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Trav6d-4Q5R1I0 Gm6576-201ENSMUST00000169678 883 ntBASIC15.06■□□□□ 0
Trav6d-4Q5R1I0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.06■□□□□ 0
Trav6d-4Q5R1I0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6d-4Q5R1I0 Gm18025-201ENSMUST00000221733 862 ntBASIC15.06■□□□□ 0
Trav6d-4Q5R1I0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6d-4Q5R1I0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6d-4Q5R1I0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav6d-4Q5R1I0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6d-4Q5R1I0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav6d-4Q5R1I0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.06■□□□□ 0
Trav6d-4Q5R1I0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav6d-4Q5R1I0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6d-4Q5R1I0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6d-4Q5R1I0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav6d-4Q5R1I0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav6d-4Q5R1I0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.05■□□□□ 0
Trav6d-4Q5R1I0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav6d-4Q5R1I0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Trav6d-4Q5R1I0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav6d-4Q5R1I0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6d-4Q5R1I0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.05■□□□□ -0
Trav6d-4Q5R1I0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav6d-4Q5R1I0 Tgds-204ENSMUST00000228543 1594 ntBASIC15.05■□□□□ -0
Trav6d-4Q5R1I0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6d-4Q5R1I0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.05■□□□□ -0
Trav6d-4Q5R1I0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav6d-4Q5R1I0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-4Q5R1I0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-4Q5R1I0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-4Q5R1I0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.04■□□□□ -0
Trav6d-4Q5R1I0 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-4Q5R1I0 Gm42545-201ENSMUST00000202755 922 ntBASIC15.04■□□□□ -0
Trav6d-4Q5R1I0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trav6d-4Q5R1I0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-4Q5R1I0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-4Q5R1I0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-4Q5R1I0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-4Q5R1I0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-4Q5R1I0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-4Q5R1I0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-4Q5R1I0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-4Q5R1I0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Trav6d-4Q5R1I0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-4Q5R1I0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Trav6d-4Q5R1I0 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-4Q5R1I0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.03■□□□□ -0
Trav6d-4Q5R1I0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav6d-4Q5R1I0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-4Q5R1I0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Trav6d-4Q5R1I0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-4Q5R1I0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-4Q5R1I0 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.03■□□□□ -0
Trav6d-4Q5R1I0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.03■□□□□ -0
Trav6d-4Q5R1I0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.03■□□□□ -0
Trav6d-4Q5R1I0 Gm43183-201ENSMUST00000200632 547 ntBASIC15.03■□□□□ -0
Trav6d-4Q5R1I0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.03■□□□□ -0
Trav6d-4Q5R1I0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-4Q5R1I0 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trav6d-4Q5R1I0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-4Q5R1I0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav6d-4Q5R1I0 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-4Q5R1I0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-4Q5R1I0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.03■□□□□ -0
Trav6d-4Q5R1I0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav6d-4Q5R1I0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav6d-4Q5R1I0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-4Q5R1I0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav6d-4Q5R1I0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-4Q5R1I0 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-4Q5R1I0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Trav6d-4Q5R1I0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6d-4Q5R1I0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms