Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7d-4Q5R1H9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav7d-4Q5R1H9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
Trav7d-4Q5R1H9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7d-4Q5R1H9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7d-4Q5R1H9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7d-4Q5R1H9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trav7d-4Q5R1H9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7d-4Q5R1H9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Trav7d-4Q5R1H9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav7d-4Q5R1H9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav7d-4Q5R1H9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav7d-4Q5R1H9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav7d-4Q5R1H9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav7d-4Q5R1H9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.22
Trav7d-4Q5R1H9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav7d-4Q5R1H9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Trav7d-4Q5R1H9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-4Q5R1H9 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-4Q5R1H9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-4Q5R1H9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-4Q5R1H9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-4Q5R1H9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-4Q5R1H9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-4Q5R1H9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
Trav7d-4Q5R1H9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-4Q5R1H9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC13.7□□□□□ -0.22
Trav7d-4Q5R1H9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-4Q5R1H9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-4Q5R1H9 Gm5921-201ENSMUST00000075898 882 ntBASIC13.7□□□□□ -0.22
Trav7d-4Q5R1H9 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-4Q5R1H9 Cap2-205ENSMUST00000225824 1634 ntBASIC13.7□□□□□ -0.22
Trav7d-4Q5R1H9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav7d-4Q5R1H9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
Trav7d-4Q5R1H9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-4Q5R1H9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-4Q5R1H9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-4Q5R1H9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-4Q5R1H9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-4Q5R1H9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav7d-4Q5R1H9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-4Q5R1H9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-4Q5R1H9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-4Q5R1H9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-4Q5R1H9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-4Q5R1H9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-4Q5R1H9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-4Q5R1H9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav7d-4Q5R1H9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7d-4Q5R1H9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7d-4Q5R1H9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7d-4Q5R1H9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7d-4Q5R1H9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7d-4Q5R1H9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7d-4Q5R1H9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7d-4Q5R1H9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7d-4Q5R1H9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7d-4Q5R1H9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7d-4Q5R1H9 Gm7860-201ENSMUST00000121190 879 ntBASIC13.69□□□□□ -0.22
Trav7d-4Q5R1H9 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.69□□□□□ -0.22
Trav7d-4Q5R1H9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7d-4Q5R1H9 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7d-4Q5R1H9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav7d-4Q5R1H9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav7d-4Q5R1H9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7d-4Q5R1H9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7d-4Q5R1H9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7d-4Q5R1H9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7d-4Q5R1H9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7d-4Q5R1H9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-4Q5R1H9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-4Q5R1H9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Trav7d-4Q5R1H9 Gm10209-201ENSMUST00000203397 1607 ntBASIC13.68□□□□□ -0.22
Trav7d-4Q5R1H9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-4Q5R1H9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-4Q5R1H9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-4Q5R1H9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-4Q5R1H9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-4Q5R1H9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-4Q5R1H9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav7d-4Q5R1H9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-4Q5R1H9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-4Q5R1H9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-4Q5R1H9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC13.68□□□□□ -0.22
Trav7d-4Q5R1H9 Gm37805-201ENSMUST00000192612 1094 ntBASIC13.68□□□□□ -0.22
Trav7d-4Q5R1H9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-4Q5R1H9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-4Q5R1H9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-4Q5R1H9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-4Q5R1H9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-4Q5R1H9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-4Q5R1H9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-4Q5R1H9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-4Q5R1H9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-4Q5R1H9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav7d-4Q5R1H9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-4Q5R1H9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-4Q5R1H9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-4Q5R1H9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-4Q5R1H9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms