Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-3Q5R1E6 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Trav6-3Q5R1E6 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav6-3Q5R1E6 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-3Q5R1E6 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-3Q5R1E6 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
Trav6-3Q5R1E6 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-3Q5R1E6 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-3Q5R1E6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav6-3Q5R1E6 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-3Q5R1E6 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-3Q5R1E6 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-3Q5R1E6 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-3Q5R1E6 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-3Q5R1E6 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-3Q5R1E6 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-3Q5R1E6 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-3Q5R1E6 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-3Q5R1E6 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-3Q5R1E6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-3Q5R1E6 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-3Q5R1E6 Gm10033-202ENSMUST00000211874 928 ntBASIC14.4□□□□□ -0.1
Trav6-3Q5R1E6 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-3Q5R1E6 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-3Q5R1E6 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-3Q5R1E6 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-3Q5R1E6 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-3Q5R1E6 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-3Q5R1E6 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav6-3Q5R1E6 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
Trav6-3Q5R1E6 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-3Q5R1E6 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-3Q5R1E6 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-3Q5R1E6 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav6-3Q5R1E6 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-3Q5R1E6 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav6-3Q5R1E6 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-3Q5R1E6 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-3Q5R1E6 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-3Q5R1E6 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-3Q5R1E6 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-3Q5R1E6 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-3Q5R1E6 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-3Q5R1E6 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.39□□□□□ -0.11
Trav6-3Q5R1E6 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-3Q5R1E6 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-3Q5R1E6 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-3Q5R1E6 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-3Q5R1E6 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-3Q5R1E6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-3Q5R1E6 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-3Q5R1E6 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-3Q5R1E6 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-3Q5R1E6 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-3Q5R1E6 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-3Q5R1E6 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Trav6-3Q5R1E6 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Trav6-3Q5R1E6 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav6-3Q5R1E6 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-3Q5R1E6 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-3Q5R1E6 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-3Q5R1E6 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-3Q5R1E6 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-3Q5R1E6 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-3Q5R1E6 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-3Q5R1E6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-3Q5R1E6 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.38□□□□□ -0.11
Trav6-3Q5R1E6 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trav6-3Q5R1E6 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-3Q5R1E6 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-3Q5R1E6 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-3Q5R1E6 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trav6-3Q5R1E6 Gm18671-201ENSMUST00000214826 683 ntBASIC14.38□□□□□ -0.11
Trav6-3Q5R1E6 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.38□□□□□ -0.11
Trav6-3Q5R1E6 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-3Q5R1E6 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-3Q5R1E6 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav6-3Q5R1E6 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-3Q5R1E6 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-3Q5R1E6 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav6-3Q5R1E6 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-3Q5R1E6 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav6-3Q5R1E6 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-3Q5R1E6 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-3Q5R1E6 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-3Q5R1E6 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-3Q5R1E6 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-3Q5R1E6 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Trav6-3Q5R1E6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-3Q5R1E6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-3Q5R1E6 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-3Q5R1E6 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav6-3Q5R1E6 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav6-3Q5R1E6 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav6-3Q5R1E6 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-3Q5R1E6 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-3Q5R1E6 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-3Q5R1E6 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-3Q5R1E6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav6-3Q5R1E6 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms