Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Bdp1Q571C7 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Bdp1Q571C7 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Bdp1Q571C7 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Bdp1Q571C7 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.28■□□□□ 0.52
Bdp1Q571C7 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Bdp1Q571C7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.28■□□□□ 0.52
Bdp1Q571C7 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Bdp1Q571C7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Bdp1Q571C7 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Bdp1Q571C7 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.27■□□□□ 0.52
Bdp1Q571C7 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Bdp1Q571C7 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.27■□□□□ 0.52
Bdp1Q571C7 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.27■□□□□ 0.52
Bdp1Q571C7 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Bdp1Q571C7 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.27■□□□□ 0.52
Bdp1Q571C7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Bdp1Q571C7 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Bdp1Q571C7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Bdp1Q571C7 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Bdp1Q571C7 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.27■□□□□ 0.51
Bdp1Q571C7 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Bdp1Q571C7 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
Bdp1Q571C7 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.27■□□□□ 0.51
Bdp1Q571C7 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.27■□□□□ 0.51
Bdp1Q571C7 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Bdp1Q571C7 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Bdp1Q571C7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Bdp1Q571C7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Bdp1Q571C7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Bdp1Q571C7 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.26■□□□□ 0.51
Bdp1Q571C7 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.26■□□□□ 0.51
Bdp1Q571C7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Bdp1Q571C7 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Bdp1Q571C7 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.26■□□□□ 0.51
Bdp1Q571C7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Bdp1Q571C7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Bdp1Q571C7 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Bdp1Q571C7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Bdp1Q571C7 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.26■□□□□ 0.51
Bdp1Q571C7 Gm5186-201ENSMUST00000218781 920 ntBASIC18.26■□□□□ 0.51
Bdp1Q571C7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Bdp1Q571C7 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Bdp1Q571C7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Bdp1Q571C7 Gm15794-201ENSMUST00000120182 631 ntBASIC18.25■□□□□ 0.51
Bdp1Q571C7 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.25■□□□□ 0.51
Bdp1Q571C7 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Bdp1Q571C7 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Bdp1Q571C7 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.25■□□□□ 0.51
Bdp1Q571C7 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Bdp1Q571C7 Gm10566-201ENSMUST00000086739 996 ntBASIC18.25■□□□□ 0.51
Bdp1Q571C7 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Bdp1Q571C7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Bdp1Q571C7 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Bdp1Q571C7 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Bdp1Q571C7 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC18.25■□□□□ 0.51
Bdp1Q571C7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Bdp1Q571C7 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Bdp1Q571C7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Bdp1Q571C7 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Bdp1Q571C7 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Bdp1Q571C7 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Bdp1Q571C7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
Bdp1Q571C7 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Bdp1Q571C7 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Bdp1Q571C7 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Bdp1Q571C7 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Bdp1Q571C7 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.24■□□□□ 0.51
Bdp1Q571C7 Gm6736-201ENSMUST00000166583 948 ntBASIC18.24■□□□□ 0.51
Bdp1Q571C7 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.24■□□□□ 0.51
Bdp1Q571C7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Bdp1Q571C7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Bdp1Q571C7 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Bdp1Q571C7 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Bdp1Q571C7 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.24■□□□□ 0.51
Bdp1Q571C7 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.24■□□□□ 0.51
Bdp1Q571C7 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Bdp1Q571C7 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.24■□□□□ 0.51
Bdp1Q571C7 Rps4l-201ENSMUST00000071745 943 ntBASIC18.24■□□□□ 0.51
Bdp1Q571C7 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Bdp1Q571C7 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Bdp1Q571C7 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Bdp1Q571C7 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Bdp1Q571C7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Bdp1Q571C7 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Bdp1Q571C7 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.23■□□□□ 0.51
Bdp1Q571C7 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Bdp1Q571C7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.23■□□□□ 0.51
Bdp1Q571C7 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.23■□□□□ 0.51
Bdp1Q571C7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Bdp1Q571C7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Bdp1Q571C7 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Bdp1Q571C7 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Bdp1Q571C7 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.23■□□□□ 0.51
Bdp1Q571C7 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Bdp1Q571C7 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Bdp1Q571C7 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Bdp1Q571C7 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Bdp1Q571C7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Bdp1Q571C7 Gm5264-201ENSMUST00000190584 848 ntBASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms