Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Syne3Q4FZC9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Syne3Q4FZC9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Syne3Q4FZC9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Syne3Q4FZC9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.06■□□□□ 0.64
Syne3Q4FZC9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
Syne3Q4FZC9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Syne3Q4FZC9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syne3Q4FZC9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syne3Q4FZC9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syne3Q4FZC9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Syne3Q4FZC9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Syne3Q4FZC9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.05■□□□□ 0.64
Syne3Q4FZC9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syne3Q4FZC9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syne3Q4FZC9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syne3Q4FZC9 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.05■□□□□ 0.64
Syne3Q4FZC9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Syne3Q4FZC9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syne3Q4FZC9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syne3Q4FZC9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Syne3Q4FZC9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Syne3Q4FZC9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Syne3Q4FZC9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syne3Q4FZC9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Syne3Q4FZC9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Syne3Q4FZC9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.04■□□□□ 0.64
Syne3Q4FZC9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Syne3Q4FZC9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Syne3Q4FZC9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Syne3Q4FZC9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.04■□□□□ 0.64
Syne3Q4FZC9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Syne3Q4FZC9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Syne3Q4FZC9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Syne3Q4FZC9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Syne3Q4FZC9 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.03■□□□□ 0.64
Syne3Q4FZC9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Syne3Q4FZC9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Syne3Q4FZC9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Syne3Q4FZC9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Syne3Q4FZC9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Syne3Q4FZC9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Syne3Q4FZC9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Syne3Q4FZC9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Syne3Q4FZC9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Syne3Q4FZC9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.02■□□□□ 0.64
Syne3Q4FZC9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Syne3Q4FZC9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Syne3Q4FZC9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Syne3Q4FZC9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Syne3Q4FZC9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Syne3Q4FZC9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Syne3Q4FZC9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Syne3Q4FZC9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Syne3Q4FZC9 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.02■□□□□ 0.64
Syne3Q4FZC9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.02■□□□□ 0.64
Syne3Q4FZC9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.02■□□□□ 0.64
Syne3Q4FZC9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Syne3Q4FZC9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Syne3Q4FZC9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Syne3Q4FZC9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Syne3Q4FZC9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Syne3Q4FZC9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Syne3Q4FZC9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Syne3Q4FZC9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Syne3Q4FZC9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Syne3Q4FZC9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Syne3Q4FZC9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Syne3Q4FZC9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.01■□□□□ 0.63
Syne3Q4FZC9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Syne3Q4FZC9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Syne3Q4FZC9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Syne3Q4FZC9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Syne3Q4FZC9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Syne3Q4FZC9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Syne3Q4FZC9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Syne3Q4FZC9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Syne3Q4FZC9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19■□□□□ 0.63
Syne3Q4FZC9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Syne3Q4FZC9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19■□□□□ 0.63
Syne3Q4FZC9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Syne3Q4FZC9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Syne3Q4FZC9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19■□□□□ 0.63
Syne3Q4FZC9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Syne3Q4FZC9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Syne3Q4FZC9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Syne3Q4FZC9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19■□□□□ 0.63
Syne3Q4FZC9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Syne3Q4FZC9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19■□□□□ 0.63
Syne3Q4FZC9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Syne3Q4FZC9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Syne3Q4FZC9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Syne3Q4FZC9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Syne3Q4FZC9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Syne3Q4FZC9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Syne3Q4FZC9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Syne3Q4FZC9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Syne3Q4FZC9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Syne3Q4FZC9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Syne3Q4FZC9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms