Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf38aQ4FK66 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.95■□□□□ 0.94
Prpf38aQ4FK66 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf38aQ4FK66 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf38aQ4FK66 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf38aQ4FK66 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf38aQ4FK66 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf38aQ4FK66 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Prpf38aQ4FK66 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf38aQ4FK66 Gm11643-201ENSMUST00000119578 864 ntBASIC20.94■□□□□ 0.94
Prpf38aQ4FK66 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Prpf38aQ4FK66 Odf3b-204ENSMUST00000227834 930 ntBASIC20.94■□□□□ 0.94
Prpf38aQ4FK66 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf38aQ4FK66 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf38aQ4FK66 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.94■□□□□ 0.94
Prpf38aQ4FK66 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.94■□□□□ 0.94
Prpf38aQ4FK66 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf38aQ4FK66 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf38aQ4FK66 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf38aQ4FK66 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf38aQ4FK66 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf38aQ4FK66 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf38aQ4FK66 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf38aQ4FK66 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf38aQ4FK66 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.93■□□□□ 0.94
Prpf38aQ4FK66 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf38aQ4FK66 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf38aQ4FK66 Timm23-208ENSMUST00000226683 750 ntBASIC20.93■□□□□ 0.94
Prpf38aQ4FK66 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf38aQ4FK66 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf38aQ4FK66 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Prpf38aQ4FK66 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf38aQ4FK66 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf38aQ4FK66 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf38aQ4FK66 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf38aQ4FK66 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prpf38aQ4FK66 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prpf38aQ4FK66 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Prpf38aQ4FK66 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prpf38aQ4FK66 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prpf38aQ4FK66 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prpf38aQ4FK66 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prpf38aQ4FK66 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Prpf38aQ4FK66 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prpf38aQ4FK66 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.92■□□□□ 0.94
Prpf38aQ4FK66 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prpf38aQ4FK66 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prpf38aQ4FK66 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Prpf38aQ4FK66 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Prpf38aQ4FK66 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Prpf38aQ4FK66 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prpf38aQ4FK66 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prpf38aQ4FK66 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Prpf38aQ4FK66 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.91■□□□□ 0.94
Prpf38aQ4FK66 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prpf38aQ4FK66 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.91■□□□□ 0.94
Prpf38aQ4FK66 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Prpf38aQ4FK66 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.91■□□□□ 0.94
Prpf38aQ4FK66 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prpf38aQ4FK66 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prpf38aQ4FK66 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prpf38aQ4FK66 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.91■□□□□ 0.94
Prpf38aQ4FK66 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Prpf38aQ4FK66 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf38aQ4FK66 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf38aQ4FK66 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.9■□□□□ 0.94
Prpf38aQ4FK66 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Prpf38aQ4FK66 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf38aQ4FK66 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf38aQ4FK66 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf38aQ4FK66 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf38aQ4FK66 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf38aQ4FK66 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf38aQ4FK66 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Prpf38aQ4FK66 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.9■□□□□ 0.94
Prpf38aQ4FK66 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf38aQ4FK66 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf38aQ4FK66 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf38aQ4FK66 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf38aQ4FK66 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.89■□□□□ 0.94
Prpf38aQ4FK66 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Prpf38aQ4FK66 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.89■□□□□ 0.94
Prpf38aQ4FK66 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Prpf38aQ4FK66 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Prpf38aQ4FK66 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prpf38aQ4FK66 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prpf38aQ4FK66 Gm13836-201ENSMUST00000121159 501 ntBASIC20.89■□□□□ 0.93
Prpf38aQ4FK66 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Prpf38aQ4FK66 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Prpf38aQ4FK66 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.89■□□□□ 0.93
Prpf38aQ4FK66 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Prpf38aQ4FK66 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Prpf38aQ4FK66 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prpf38aQ4FK66 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prpf38aQ4FK66 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
Prpf38aQ4FK66 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prpf38aQ4FK66 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Prpf38aQ4FK66 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prpf38aQ4FK66 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prpf38aQ4FK66 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms