Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim80Q3V061 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim80Q3V061 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim80Q3V061 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim80Q3V061 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim80Q3V061 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim80Q3V061 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim80Q3V061 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim80Q3V061 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim80Q3V061 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim80Q3V061 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim80Q3V061 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim80Q3V061 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.5■□□□□ 0.55
Trim80Q3V061 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Trim80Q3V061 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim80Q3V061 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim80Q3V061 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim80Q3V061 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim80Q3V061 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim80Q3V061 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Trim80Q3V061 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.49■□□□□ 0.55
Trim80Q3V061 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim80Q3V061 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim80Q3V061 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim80Q3V061 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.49■□□□□ 0.55
Trim80Q3V061 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim80Q3V061 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.49■□□□□ 0.55
Trim80Q3V061 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim80Q3V061 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim80Q3V061 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim80Q3V061 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim80Q3V061 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Trim80Q3V061 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim80Q3V061 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trim80Q3V061 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trim80Q3V061 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.48■□□□□ 0.55
Trim80Q3V061 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.48■□□□□ 0.55
Trim80Q3V061 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trim80Q3V061 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim80Q3V061 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim80Q3V061 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim80Q3V061 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Trim80Q3V061 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.48■□□□□ 0.55
Trim80Q3V061 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Trim80Q3V061 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim80Q3V061 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim80Q3V061 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.48■□□□□ 0.55
Trim80Q3V061 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim80Q3V061 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Trim80Q3V061 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim80Q3V061 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim80Q3V061 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim80Q3V061 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim80Q3V061 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim80Q3V061 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.47■□□□□ 0.55
Trim80Q3V061 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.47■□□□□ 0.55
Trim80Q3V061 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim80Q3V061 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim80Q3V061 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim80Q3V061 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim80Q3V061 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim80Q3V061 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim80Q3V061 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim80Q3V061 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim80Q3V061 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Trim80Q3V061 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim80Q3V061 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim80Q3V061 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
Trim80Q3V061 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim80Q3V061 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Trim80Q3V061 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim80Q3V061 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.46■□□□□ 0.55
Trim80Q3V061 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.46■□□□□ 0.55
Trim80Q3V061 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim80Q3V061 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Trim80Q3V061 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim80Q3V061 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
Trim80Q3V061 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim80Q3V061 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim80Q3V061 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim80Q3V061 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim80Q3V061 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim80Q3V061 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Trim80Q3V061 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim80Q3V061 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Trim80Q3V061 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Trim80Q3V061 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.45■□□□□ 0.54
Trim80Q3V061 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.45■□□□□ 0.54
Trim80Q3V061 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim80Q3V061 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Trim80Q3V061 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim80Q3V061 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim80Q3V061 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim80Q3V061 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim80Q3V061 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim80Q3V061 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Trim80Q3V061 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim80Q3V061 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.44■□□□□ 0.54
Trim80Q3V061 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim80Q3V061 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms