Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf223Q3UV31 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf223Q3UV31 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf223Q3UV31 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf223Q3UV31 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.41■□□□□ 0.38
Rnf223Q3UV31 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf223Q3UV31 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf223Q3UV31 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf223Q3UV31 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf223Q3UV31 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf223Q3UV31 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Rnf223Q3UV31 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf223Q3UV31 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf223Q3UV31 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf223Q3UV31 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf223Q3UV31 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf223Q3UV31 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.4■□□□□ 0.38
Rnf223Q3UV31 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf223Q3UV31 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf223Q3UV31 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf223Q3UV31 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.4■□□□□ 0.38
Rnf223Q3UV31 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf223Q3UV31 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.4■□□□□ 0.38
Rnf223Q3UV31 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Rnf223Q3UV31 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.39■□□□□ 0.38
Rnf223Q3UV31 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.38
Rnf223Q3UV31 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rnf223Q3UV31 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rnf223Q3UV31 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.39■□□□□ 0.37
Rnf223Q3UV31 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf223Q3UV31 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf223Q3UV31 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.39■□□□□ 0.37
Rnf223Q3UV31 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.39■□□□□ 0.37
Rnf223Q3UV31 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf223Q3UV31 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf223Q3UV31 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.39■□□□□ 0.37
Rnf223Q3UV31 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.39■□□□□ 0.37
Rnf223Q3UV31 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf223Q3UV31 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.39■□□□□ 0.37
Rnf223Q3UV31 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf223Q3UV31 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf223Q3UV31 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf223Q3UV31 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf223Q3UV31 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf223Q3UV31 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf223Q3UV31 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf223Q3UV31 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf223Q3UV31 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf223Q3UV31 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf223Q3UV31 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.38■□□□□ 0.37
Rnf223Q3UV31 Gm15565-201ENSMUST00000118890 427 ntBASIC17.38■□□□□ 0.37
Rnf223Q3UV31 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf223Q3UV31 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf223Q3UV31 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf223Q3UV31 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf223Q3UV31 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf223Q3UV31 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf223Q3UV31 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf223Q3UV31 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf223Q3UV31 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf223Q3UV31 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf223Q3UV31 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf223Q3UV31 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf223Q3UV31 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.37■□□□□ 0.37
Rnf223Q3UV31 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rnf223Q3UV31 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf223Q3UV31 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf223Q3UV31 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf223Q3UV31 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.37■□□□□ 0.37
Rnf223Q3UV31 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf223Q3UV31 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.37■□□□□ 0.37
Rnf223Q3UV31 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Rnf223Q3UV31 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.37■□□□□ 0.37
Rnf223Q3UV31 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.37■□□□□ 0.37
Rnf223Q3UV31 Gm5417-201ENSMUST00000079706 384 ntBASIC17.37■□□□□ 0.37
Rnf223Q3UV31 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf223Q3UV31 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf223Q3UV31 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf223Q3UV31 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf223Q3UV31 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf223Q3UV31 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf223Q3UV31 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.37■□□□□ 0.37
Rnf223Q3UV31 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf223Q3UV31 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf223Q3UV31 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.37■□□□□ 0.37
Rnf223Q3UV31 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf223Q3UV31 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf223Q3UV31 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf223Q3UV31 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf223Q3UV31 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf223Q3UV31 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf223Q3UV31 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rnf223Q3UV31 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf223Q3UV31 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.36■□□□□ 0.37
Rnf223Q3UV31 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf223Q3UV31 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf223Q3UV31 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf223Q3UV31 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf223Q3UV31 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf223Q3UV31 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms