Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Lsmem1Q3UQS2 Gm27011-201ENSMUST00000182352 972 ntBASIC18.2■□□□□ 0.5
Lsmem1Q3UQS2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lsmem1Q3UQS2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lsmem1Q3UQS2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Lsmem1Q3UQS2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Lsmem1Q3UQS2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lsmem1Q3UQS2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Lsmem1Q3UQS2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lsmem1Q3UQS2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lsmem1Q3UQS2 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.2■□□□□ 0.5
Lsmem1Q3UQS2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lsmem1Q3UQS2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lsmem1Q3UQS2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lsmem1Q3UQS2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.19■□□□□ 0.5
Lsmem1Q3UQS2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lsmem1Q3UQS2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lsmem1Q3UQS2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lsmem1Q3UQS2 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.19■□□□□ 0.5
Lsmem1Q3UQS2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lsmem1Q3UQS2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lsmem1Q3UQS2 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.19■□□□□ 0.5
Lsmem1Q3UQS2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.19■□□□□ 0.5
Lsmem1Q3UQS2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lsmem1Q3UQS2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Lsmem1Q3UQS2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.18■□□□□ 0.5
Lsmem1Q3UQS2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lsmem1Q3UQS2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lsmem1Q3UQS2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lsmem1Q3UQS2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lsmem1Q3UQS2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.18■□□□□ 0.5
Lsmem1Q3UQS2 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.18■□□□□ 0.5
Lsmem1Q3UQS2 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.18■□□□□ 0.5
Lsmem1Q3UQS2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.18■□□□□ 0.5
Lsmem1Q3UQS2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lsmem1Q3UQS2 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.18■□□□□ 0.5
Lsmem1Q3UQS2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lsmem1Q3UQS2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.18■□□□□ 0.5
Lsmem1Q3UQS2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Lsmem1Q3UQS2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lsmem1Q3UQS2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Lsmem1Q3UQS2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lsmem1Q3UQS2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Lsmem1Q3UQS2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsmem1Q3UQS2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.17■□□□□ 0.5
Lsmem1Q3UQS2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsmem1Q3UQS2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Lsmem1Q3UQS2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsmem1Q3UQS2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsmem1Q3UQS2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lsmem1Q3UQS2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Lsmem1Q3UQS2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.17■□□□□ 0.5
Lsmem1Q3UQS2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.17■□□□□ 0.5
Lsmem1Q3UQS2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsmem1Q3UQS2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsmem1Q3UQS2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsmem1Q3UQS2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lsmem1Q3UQS2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.17■□□□□ 0.5
Lsmem1Q3UQS2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.17■□□□□ 0.5
Lsmem1Q3UQS2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsmem1Q3UQS2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsmem1Q3UQS2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsmem1Q3UQS2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsmem1Q3UQS2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsmem1Q3UQS2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsmem1Q3UQS2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsmem1Q3UQS2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Lsmem1Q3UQS2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Lsmem1Q3UQS2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.16■□□□□ 0.5
Lsmem1Q3UQS2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lsmem1Q3UQS2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsmem1Q3UQS2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsmem1Q3UQS2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsmem1Q3UQS2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Lsmem1Q3UQS2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsmem1Q3UQS2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsmem1Q3UQS2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsmem1Q3UQS2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsmem1Q3UQS2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Lsmem1Q3UQS2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsmem1Q3UQS2 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.15■□□□□ 0.5
Lsmem1Q3UQS2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsmem1Q3UQS2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsmem1Q3UQS2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsmem1Q3UQS2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsmem1Q3UQS2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsmem1Q3UQS2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.15■□□□□ 0.5
Lsmem1Q3UQS2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.15■□□□□ 0.5
Lsmem1Q3UQS2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.15■□□□□ 0.5
Lsmem1Q3UQS2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsmem1Q3UQS2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.15■□□□□ 0.5
Lsmem1Q3UQS2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.15■□□□□ 0.5
Lsmem1Q3UQS2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Lsmem1Q3UQS2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Lsmem1Q3UQS2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lsmem1Q3UQS2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lsmem1Q3UQS2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lsmem1Q3UQS2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lsmem1Q3UQS2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lsmem1Q3UQS2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms