Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.87■□□□□ 0.61
Nlrc4Q3UP24 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nlrc4Q3UP24 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.87■□□□□ 0.61
Nlrc4Q3UP24 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.87■□□□□ 0.61
Nlrc4Q3UP24 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Nlrc4Q3UP24 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nlrc4Q3UP24 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nlrc4Q3UP24 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nlrc4Q3UP24 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.87■□□□□ 0.61
Nlrc4Q3UP24 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nlrc4Q3UP24 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nlrc4Q3UP24 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nlrc4Q3UP24 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nlrc4Q3UP24 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nlrc4Q3UP24 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nlrc4Q3UP24 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nlrc4Q3UP24 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.87■□□□□ 0.61
Nlrc4Q3UP24 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nlrc4Q3UP24 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nlrc4Q3UP24 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Nlrc4Q3UP24 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Nlrc4Q3UP24 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nlrc4Q3UP24 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Nlrc4Q3UP24 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nlrc4Q3UP24 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.86■□□□□ 0.61
Nlrc4Q3UP24 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nlrc4Q3UP24 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.86■□□□□ 0.61
Nlrc4Q3UP24 Gm22240-201ENSMUST00000175225 82 ntBASIC18.86■□□□□ 0.61
Nlrc4Q3UP24 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nlrc4Q3UP24 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.86■□□□□ 0.61
Nlrc4Q3UP24 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.86■□□□□ 0.61
Nlrc4Q3UP24 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nlrc4Q3UP24 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.86■□□□□ 0.61
Nlrc4Q3UP24 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nlrc4Q3UP24 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nlrc4Q3UP24 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Nlrc4Q3UP24 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nlrc4Q3UP24 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.86■□□□□ 0.61
Nlrc4Q3UP24 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.86■□□□□ 0.61
Nlrc4Q3UP24 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nlrc4Q3UP24 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.86■□□□□ 0.61
Nlrc4Q3UP24 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nlrc4Q3UP24 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nlrc4Q3UP24 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nlrc4Q3UP24 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nlrc4Q3UP24 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nlrc4Q3UP24 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.85■□□□□ 0.61
Nlrc4Q3UP24 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nlrc4Q3UP24 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nlrc4Q3UP24 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nlrc4Q3UP24 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nlrc4Q3UP24 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nlrc4Q3UP24 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nlrc4Q3UP24 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.85■□□□□ 0.61
Nlrc4Q3UP24 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Nlrc4Q3UP24 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nlrc4Q3UP24 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.84■□□□□ 0.61
Nlrc4Q3UP24 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Nlrc4Q3UP24 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nlrc4Q3UP24 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nlrc4Q3UP24 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nlrc4Q3UP24 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nlrc4Q3UP24 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nlrc4Q3UP24 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Nlrc4Q3UP24 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.84■□□□□ 0.61
Nlrc4Q3UP24 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.84■□□□□ 0.61
Nlrc4Q3UP24 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nlrc4Q3UP24 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Nlrc4Q3UP24 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nlrc4Q3UP24 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.84■□□□□ 0.61
Nlrc4Q3UP24 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nlrc4Q3UP24 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nlrc4Q3UP24 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nlrc4Q3UP24 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Nlrc4Q3UP24 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nlrc4Q3UP24 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nlrc4Q3UP24 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Nlrc4Q3UP24 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.83■□□□□ 0.6
Nlrc4Q3UP24 Mir6349-201ENSMUST00000184059 97 ntBASIC18.83■□□□□ 0.6
Nlrc4Q3UP24 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nlrc4Q3UP24 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nlrc4Q3UP24 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Nlrc4Q3UP24 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.83■□□□□ 0.6
Nlrc4Q3UP24 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Nlrc4Q3UP24 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Nlrc4Q3UP24 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nlrc4Q3UP24 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.82■□□□□ 0.6
Nlrc4Q3UP24 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Nlrc4Q3UP24 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Nlrc4Q3UP24 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.82■□□□□ 0.6
Nlrc4Q3UP24 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nlrc4Q3UP24 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nlrc4Q3UP24 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nlrc4Q3UP24 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nlrc4Q3UP24 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nlrc4Q3UP24 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Nlrc4Q3UP24 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nlrc4Q3UP24 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nlrc4Q3UP24 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nlrc4Q3UP24 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms