Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.42■□□□□ 0.7
Snx27Q3UHD6 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snx27Q3UHD6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
Snx27Q3UHD6 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snx27Q3UHD6 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snx27Q3UHD6 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snx27Q3UHD6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Snx27Q3UHD6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Snx27Q3UHD6 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Snx27Q3UHD6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Snx27Q3UHD6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Snx27Q3UHD6 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Snx27Q3UHD6 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Snx27Q3UHD6 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Snx27Q3UHD6 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Snx27Q3UHD6 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.41■□□□□ 0.7
Snx27Q3UHD6 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Snx27Q3UHD6 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.41■□□□□ 0.7
Snx27Q3UHD6 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.41■□□□□ 0.7
Snx27Q3UHD6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Snx27Q3UHD6 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Snx27Q3UHD6 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Snx27Q3UHD6 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.41■□□□□ 0.7
Snx27Q3UHD6 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Snx27Q3UHD6 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Snx27Q3UHD6 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Snx27Q3UHD6 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Snx27Q3UHD6 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Snx27Q3UHD6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.4■□□□□ 0.7
Snx27Q3UHD6 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.4■□□□□ 0.7
Snx27Q3UHD6 Gm3375-201ENSMUST00000203929 796 ntBASIC19.4■□□□□ 0.7
Snx27Q3UHD6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Snx27Q3UHD6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Snx27Q3UHD6 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Snx27Q3UHD6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Snx27Q3UHD6 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Snx27Q3UHD6 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.4■□□□□ 0.7
Snx27Q3UHD6 Gm13836-201ENSMUST00000121159 501 ntBASIC19.39■□□□□ 0.69
Snx27Q3UHD6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Snx27Q3UHD6 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Snx27Q3UHD6 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.39■□□□□ 0.69
Snx27Q3UHD6 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Snx27Q3UHD6 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Snx27Q3UHD6 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Snx27Q3UHD6 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.38■□□□□ 0.69
Snx27Q3UHD6 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Snx27Q3UHD6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Snx27Q3UHD6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Snx27Q3UHD6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Snx27Q3UHD6 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.38■□□□□ 0.69
Snx27Q3UHD6 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Snx27Q3UHD6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Snx27Q3UHD6 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Snx27Q3UHD6 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Snx27Q3UHD6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Snx27Q3UHD6 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Snx27Q3UHD6 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Snx27Q3UHD6 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Snx27Q3UHD6 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Snx27Q3UHD6 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Snx27Q3UHD6 Gm10517-202ENSMUST00000192970 758 ntBASIC19.37■□□□□ 0.69
Snx27Q3UHD6 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.37■□□□□ 0.69
Snx27Q3UHD6 Gm43799-201ENSMUST00000201845 579 ntBASIC19.37■□□□□ 0.69
Snx27Q3UHD6 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.37■□□□□ 0.69
Snx27Q3UHD6 Gm30025-201ENSMUST00000218555 728 ntBASIC19.37■□□□□ 0.69
Snx27Q3UHD6 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Snx27Q3UHD6 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Snx27Q3UHD6 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Snx27Q3UHD6 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Snx27Q3UHD6 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Snx27Q3UHD6 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Snx27Q3UHD6 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.36■□□□□ 0.69
Snx27Q3UHD6 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Snx27Q3UHD6 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Snx27Q3UHD6 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Snx27Q3UHD6 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Snx27Q3UHD6 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Snx27Q3UHD6 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Snx27Q3UHD6 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Snx27Q3UHD6 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.36■□□□□ 0.69
Snx27Q3UHD6 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Snx27Q3UHD6 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Snx27Q3UHD6 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Snx27Q3UHD6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Snx27Q3UHD6 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Snx27Q3UHD6 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Snx27Q3UHD6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Snx27Q3UHD6 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Snx27Q3UHD6 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.35■□□□□ 0.69
Snx27Q3UHD6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Snx27Q3UHD6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.35■□□□□ 0.69
Snx27Q3UHD6 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Snx27Q3UHD6 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.35■□□□□ 0.69
Snx27Q3UHD6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.35■□□□□ 0.69
Snx27Q3UHD6 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Snx27Q3UHD6 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.35■□□□□ 0.69
Snx27Q3UHD6 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Snx27Q3UHD6 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Snx27Q3UHD6 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Snx27Q3UHD6 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms