Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Lins1Q3U1D0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Lins1Q3U1D0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.39■■□□□ 1.01
Lins1Q3U1D0 Gm37292-201ENSMUST00000192062 758 ntBASIC21.39■■□□□ 1.01
Lins1Q3U1D0 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.39■■□□□ 1.01
Lins1Q3U1D0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lins1Q3U1D0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lins1Q3U1D0 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lins1Q3U1D0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lins1Q3U1D0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lins1Q3U1D0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Lins1Q3U1D0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Lins1Q3U1D0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lins1Q3U1D0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Lins1Q3U1D0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.38■■□□□ 1.01
Lins1Q3U1D0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC21.38■■□□□ 1.01
Lins1Q3U1D0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lins1Q3U1D0 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.38■■□□□ 1.01
Lins1Q3U1D0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.38■■□□□ 1.01
Lins1Q3U1D0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lins1Q3U1D0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC21.38■■□□□ 1.01
Lins1Q3U1D0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lins1Q3U1D0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
Lins1Q3U1D0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lins1Q3U1D0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lins1Q3U1D0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lins1Q3U1D0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lins1Q3U1D0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Lins1Q3U1D0 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.37■■□□□ 1.01
Lins1Q3U1D0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lins1Q3U1D0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Lins1Q3U1D0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Lins1Q3U1D0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.36■■□□□ 1.01
Lins1Q3U1D0 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.36■■□□□ 1.01
Lins1Q3U1D0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Lins1Q3U1D0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lins1Q3U1D0 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC21.36■■□□□ 1.01
Lins1Q3U1D0 Gm6433-201ENSMUST00000118634 875 ntBASIC21.36■■□□□ 1.01
Lins1Q3U1D0 Gm43799-201ENSMUST00000201845 579 ntBASIC21.36■■□□□ 1.01
Lins1Q3U1D0 Gm16042-201ENSMUST00000204813 1247 ntBASIC21.36■■□□□ 1.01
Lins1Q3U1D0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lins1Q3U1D0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lins1Q3U1D0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Lins1Q3U1D0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lins1Q3U1D0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lins1Q3U1D0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.36■■□□□ 1.01
Lins1Q3U1D0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Lins1Q3U1D0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Lins1Q3U1D0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lins1Q3U1D0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lins1Q3U1D0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lins1Q3U1D0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lins1Q3U1D0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lins1Q3U1D0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Lins1Q3U1D0 Mir6349-201ENSMUST00000184059 97 ntBASIC21.35■■□□□ 1.01
Lins1Q3U1D0 AC121577.1-201ENSMUST00000227302 707 ntBASIC21.35■■□□□ 1.01
Lins1Q3U1D0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lins1Q3U1D0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lins1Q3U1D0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC21.35■■□□□ 1.01
Lins1Q3U1D0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lins1Q3U1D0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.34■■□□□ 1.01
Lins1Q3U1D0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lins1Q3U1D0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lins1Q3U1D0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lins1Q3U1D0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Lins1Q3U1D0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC21.34■■□□□ 1.01
Lins1Q3U1D0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC21.34■■□□□ 1.01
Lins1Q3U1D0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Lins1Q3U1D0 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lins1Q3U1D0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lins1Q3U1D0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lins1Q3U1D0 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lins1Q3U1D0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lins1Q3U1D0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lins1Q3U1D0 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.33■■□□□ 1.01
Lins1Q3U1D0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lins1Q3U1D0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC21.33■■□□□ 1.01
Lins1Q3U1D0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC21.33■■□□□ 1.01
Lins1Q3U1D0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
Lins1Q3U1D0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.33■■□□□ 1
Lins1Q3U1D0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Lins1Q3U1D0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Lins1Q3U1D0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1
Lins1Q3U1D0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Lins1Q3U1D0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC21.32■■□□□ 1
Lins1Q3U1D0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC21.32■■□□□ 1
Lins1Q3U1D0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Lins1Q3U1D0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.32■■□□□ 1
Lins1Q3U1D0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.32■■□□□ 1
Lins1Q3U1D0 Arhgef4-208ENSMUST00000211073 171 ntBASIC21.32■■□□□ 1
Lins1Q3U1D0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lins1Q3U1D0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.32■■□□□ 1
Lins1Q3U1D0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Lins1Q3U1D0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lins1Q3U1D0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lins1Q3U1D0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.32■■□□□ 1
Lins1Q3U1D0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Lins1Q3U1D0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC21.31■■□□□ 1
Lins1Q3U1D0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lins1Q3U1D0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms