Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col19a1Q0VF58 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col19a1Q0VF58 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col19a1Q0VF58 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col19a1Q0VF58 Gm6623-201ENSMUST00000173570 544 ntBASIC19.21■□□□□ 0.67
Col19a1Q0VF58 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col19a1Q0VF58 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col19a1Q0VF58 Birc2-201ENSMUST00000054878 378 ntBASIC19.21■□□□□ 0.67
Col19a1Q0VF58 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.21■□□□□ 0.67
Col19a1Q0VF58 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col19a1Q0VF58 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Col19a1Q0VF58 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Col19a1Q0VF58 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.2■□□□□ 0.66
Col19a1Q0VF58 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col19a1Q0VF58 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.2■□□□□ 0.66
Col19a1Q0VF58 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.2■□□□□ 0.66
Col19a1Q0VF58 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col19a1Q0VF58 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col19a1Q0VF58 Gm10566-201ENSMUST00000086739 996 ntBASIC19.2■□□□□ 0.66
Col19a1Q0VF58 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col19a1Q0VF58 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col19a1Q0VF58 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col19a1Q0VF58 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Col19a1Q0VF58 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col19a1Q0VF58 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col19a1Q0VF58 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col19a1Q0VF58 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.19■□□□□ 0.66
Col19a1Q0VF58 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Col19a1Q0VF58 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col19a1Q0VF58 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.19■□□□□ 0.66
Col19a1Q0VF58 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col19a1Q0VF58 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Col19a1Q0VF58 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Col19a1Q0VF58 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col19a1Q0VF58 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Col19a1Q0VF58 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col19a1Q0VF58 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col19a1Q0VF58 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Col19a1Q0VF58 Gm24841-201ENSMUST00000158676 357 ntBASIC19.18■□□□□ 0.66
Col19a1Q0VF58 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col19a1Q0VF58 Mir8098-201ENSMUST00000184011 137 ntBASIC19.18■□□□□ 0.66
Col19a1Q0VF58 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col19a1Q0VF58 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Col19a1Q0VF58 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col19a1Q0VF58 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col19a1Q0VF58 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col19a1Q0VF58 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col19a1Q0VF58 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Col19a1Q0VF58 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Col19a1Q0VF58 Olfr129-201ENSMUST00000122318 993 ntBASIC19.17■□□□□ 0.66
Col19a1Q0VF58 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.17■□□□□ 0.66
Col19a1Q0VF58 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col19a1Q0VF58 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col19a1Q0VF58 Gm27525-201ENSMUST00000184465 107 ntBASIC19.17■□□□□ 0.66
Col19a1Q0VF58 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Col19a1Q0VF58 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC19.17■□□□□ 0.66
Col19a1Q0VF58 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col19a1Q0VF58 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Col19a1Q0VF58 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col19a1Q0VF58 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col19a1Q0VF58 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col19a1Q0VF58 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col19a1Q0VF58 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Col19a1Q0VF58 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col19a1Q0VF58 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col19a1Q0VF58 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col19a1Q0VF58 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col19a1Q0VF58 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Col19a1Q0VF58 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col19a1Q0VF58 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col19a1Q0VF58 Mir770-201ENSMUST00000103252 94 ntBASIC19.16■□□□□ 0.66
Col19a1Q0VF58 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
Col19a1Q0VF58 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.16■□□□□ 0.66
Col19a1Q0VF58 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC19.16■□□□□ 0.66
Col19a1Q0VF58 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.16■□□□□ 0.66
Col19a1Q0VF58 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.16■□□□□ 0.66
Col19a1Q0VF58 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col19a1Q0VF58 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col19a1Q0VF58 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col19a1Q0VF58 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col19a1Q0VF58 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Col19a1Q0VF58 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col19a1Q0VF58 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col19a1Q0VF58 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Col19a1Q0VF58 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col19a1Q0VF58 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Col19a1Q0VF58 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Col19a1Q0VF58 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Col19a1Q0VF58 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.15■□□□□ 0.66
Col19a1Q0VF58 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.15■□□□□ 0.66
Col19a1Q0VF58 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col19a1Q0VF58 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col19a1Q0VF58 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col19a1Q0VF58 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Col19a1Q0VF58 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Col19a1Q0VF58 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Col19a1Q0VF58 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Col19a1Q0VF58 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col19a1Q0VF58 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col19a1Q0VF58 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms