Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.34■□□□□ 0.37
Ptchd3Q0EEE2 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ptchd3Q0EEE2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ptchd3Q0EEE2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ptchd3Q0EEE2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ptchd3Q0EEE2 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ptchd3Q0EEE2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ptchd3Q0EEE2 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.34■□□□□ 0.37
Ptchd3Q0EEE2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Ptchd3Q0EEE2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ptchd3Q0EEE2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.33■□□□□ 0.37
Ptchd3Q0EEE2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ptchd3Q0EEE2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.33■□□□□ 0.37
Ptchd3Q0EEE2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ptchd3Q0EEE2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.33■□□□□ 0.37
Ptchd3Q0EEE2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.33■□□□□ 0.36
Ptchd3Q0EEE2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.33■□□□□ 0.36
Ptchd3Q0EEE2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ptchd3Q0EEE2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Ptchd3Q0EEE2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ptchd3Q0EEE2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ptchd3Q0EEE2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ptchd3Q0EEE2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ptchd3Q0EEE2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ptchd3Q0EEE2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ptchd3Q0EEE2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ptchd3Q0EEE2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ptchd3Q0EEE2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ptchd3Q0EEE2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ptchd3Q0EEE2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ptchd3Q0EEE2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ptchd3Q0EEE2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ptchd3Q0EEE2 Reep4-203ENSMUST00000226563 1444 ntBASIC17.32■□□□□ 0.36
Ptchd3Q0EEE2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ptchd3Q0EEE2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ptchd3Q0EEE2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.32■□□□□ 0.36
Ptchd3Q0EEE2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ptchd3Q0EEE2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ptchd3Q0EEE2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.32■□□□□ 0.36
Ptchd3Q0EEE2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ptchd3Q0EEE2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.32■□□□□ 0.36
Ptchd3Q0EEE2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.32■□□□□ 0.36
Ptchd3Q0EEE2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ptchd3Q0EEE2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ptchd3Q0EEE2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ptchd3Q0EEE2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ptchd3Q0EEE2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.31■□□□□ 0.36
Ptchd3Q0EEE2 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.31■□□□□ 0.36
Ptchd3Q0EEE2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ptchd3Q0EEE2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ptchd3Q0EEE2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.31■□□□□ 0.36
Ptchd3Q0EEE2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.31■□□□□ 0.36
Ptchd3Q0EEE2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ptchd3Q0EEE2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ptchd3Q0EEE2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ptchd3Q0EEE2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ptchd3Q0EEE2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ptchd3Q0EEE2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ptchd3Q0EEE2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ptchd3Q0EEE2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ptchd3Q0EEE2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ptchd3Q0EEE2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ptchd3Q0EEE2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ptchd3Q0EEE2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.3■□□□□ 0.36
Ptchd3Q0EEE2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.3■□□□□ 0.36
Ptchd3Q0EEE2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.3■□□□□ 0.36
Ptchd3Q0EEE2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.3■□□□□ 0.36
Ptchd3Q0EEE2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ptchd3Q0EEE2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ptchd3Q0EEE2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ptchd3Q0EEE2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ptchd3Q0EEE2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ptchd3Q0EEE2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ptchd3Q0EEE2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ptchd3Q0EEE2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ptchd3Q0EEE2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ptchd3Q0EEE2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ptchd3Q0EEE2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.29■□□□□ 0.36
Ptchd3Q0EEE2 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ptchd3Q0EEE2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ptchd3Q0EEE2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ptchd3Q0EEE2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ptchd3Q0EEE2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.29■□□□□ 0.36
Ptchd3Q0EEE2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ptchd3Q0EEE2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Ptchd3Q0EEE2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ptchd3Q0EEE2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ptchd3Q0EEE2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ptchd3Q0EEE2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ptchd3Q0EEE2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ptchd3Q0EEE2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ptchd3Q0EEE2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ptchd3Q0EEE2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ptchd3Q0EEE2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ptchd3Q0EEE2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ptchd3Q0EEE2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ptchd3Q0EEE2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ptchd3Q0EEE2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ptchd3Q0EEE2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ptchd3Q0EEE2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms