Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.6■□□□□ 0.41
Sox4Q06831 Gm15375-201ENSMUST00000119510 849 ntBASIC17.6■□□□□ 0.41
Sox4Q06831 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sox4Q06831 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox4Q06831 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox4Q06831 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sox4Q06831 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox4Q06831 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.59■□□□□ 0.41
Sox4Q06831 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sox4Q06831 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox4Q06831 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.59■□□□□ 0.41
Sox4Q06831 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox4Q06831 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Sox4Q06831 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.59■□□□□ 0.41
Sox4Q06831 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox4Q06831 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox4Q06831 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox4Q06831 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox4Q06831 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.41
Sox4Q06831 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.58■□□□□ 0.41
Sox4Q06831 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sox4Q06831 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Sox4Q06831 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.58■□□□□ 0.41
Sox4Q06831 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sox4Q06831 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sox4Q06831 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.58■□□□□ 0.4
Sox4Q06831 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Sox4Q06831 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox4Q06831 Gm10812-201ENSMUST00000099864 546 ntBASIC17.58■□□□□ 0.4
Sox4Q06831 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox4Q06831 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox4Q06831 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox4Q06831 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Sox4Q06831 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox4Q06831 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox4Q06831 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox4Q06831 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Sox4Q06831 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
Sox4Q06831 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox4Q06831 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox4Q06831 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.57■□□□□ 0.4
Sox4Q06831 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox4Q06831 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox4Q06831 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Sox4Q06831 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox4Q06831 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sox4Q06831 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sox4Q06831 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.57■□□□□ 0.4
Sox4Q06831 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.57■□□□□ 0.4
Sox4Q06831 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox4Q06831 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox4Q06831 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox4Q06831 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sox4Q06831 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox4Q06831 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox4Q06831 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox4Q06831 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Sox4Q06831 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox4Q06831 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sox4Q06831 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.56■□□□□ 0.4
Sox4Q06831 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox4Q06831 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox4Q06831 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox4Q06831 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sox4Q06831 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Sox4Q06831 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.56■□□□□ 0.4
Sox4Q06831 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.56■□□□□ 0.4
Sox4Q06831 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox4Q06831 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox4Q06831 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Sox4Q06831 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox4Q06831 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.56■□□□□ 0.4
Sox4Q06831 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox4Q06831 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox4Q06831 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.56■□□□□ 0.4
Sox4Q06831 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.55■□□□□ 0.4
Sox4Q06831 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox4Q06831 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.55■□□□□ 0.4
Sox4Q06831 Gm15378-201ENSMUST00000121894 207 ntBASIC17.55■□□□□ 0.4
Sox4Q06831 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sox4Q06831 Mir2861-201ENSMUST00000175539 82 ntBASIC17.55■□□□□ 0.4
Sox4Q06831 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox4Q06831 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox4Q06831 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox4Q06831 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.55■□□□□ 0.4
Sox4Q06831 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.55■□□□□ 0.4
Sox4Q06831 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox4Q06831 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.55■□□□□ 0.4
Sox4Q06831 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox4Q06831 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Sox4Q06831 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Sox4Q06831 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.54■□□□□ 0.4
Sox4Q06831 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox4Q06831 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.54■□□□□ 0.4
Sox4Q06831 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sox4Q06831 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
Sox4Q06831 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Sox4Q06831 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.54■□□□□ 0.4
Sox4Q06831 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sox4Q06831 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms