Protein–RNA interactions for Protein: P97350

Pkp1, Plakophilin-1, mousemouse

Known RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp1P97350 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pkp1P97350 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pkp1P97350 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pkp1P97350 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pkp1P97350 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pkp1P97350 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.99■□□□□ 0.95
Pkp1P97350 Gm5408-201ENSMUST00000197998 747 ntBASIC20.99■□□□□ 0.95
Pkp1P97350 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pkp1P97350 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pkp1P97350 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pkp1P97350 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pkp1P97350 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pkp1P97350 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pkp1P97350 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pkp1P97350 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.99■□□□□ 0.95
Pkp1P97350 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pkp1P97350 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pkp1P97350 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.98■□□□□ 0.95
Pkp1P97350 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pkp1P97350 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.98■□□□□ 0.95
Pkp1P97350 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Pkp1P97350 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pkp1P97350 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pkp1P97350 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pkp1P97350 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.98■□□□□ 0.95
Pkp1P97350 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pkp1P97350 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pkp1P97350 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Pkp1P97350 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pkp1P97350 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pkp1P97350 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.98■□□□□ 0.95
Pkp1P97350 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pkp1P97350 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pkp1P97350 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pkp1P97350 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.97■□□□□ 0.95
Pkp1P97350 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.97■□□□□ 0.95
Pkp1P97350 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.97■□□□□ 0.95
Pkp1P97350 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.97■□□□□ 0.95
Pkp1P97350 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pkp1P97350 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pkp1P97350 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pkp1P97350 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Pkp1P97350 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Pkp1P97350 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pkp1P97350 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pkp1P97350 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pkp1P97350 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pkp1P97350 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pkp1P97350 Mtag2-201ENSMUST00000058665 714 ntBASIC20.96■□□□□ 0.95
Pkp1P97350 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pkp1P97350 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pkp1P97350 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pkp1P97350 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Pkp1P97350 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pkp1P97350 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pkp1P97350 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pkp1P97350 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pkp1P97350 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pkp1P97350 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Pkp1P97350 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pkp1P97350 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Pkp1P97350 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Pkp1P97350 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pkp1P97350 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.95■□□□□ 0.94
Pkp1P97350 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pkp1P97350 Gm10602-201ENSMUST00000098239 609 ntBASIC20.95■□□□□ 0.94
Pkp1P97350 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pkp1P97350 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.95■□□□□ 0.94
Pkp1P97350 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.95■□□□□ 0.94
Pkp1P97350 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pkp1P97350 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.94■□□□□ 0.94
Pkp1P97350 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pkp1P97350 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.94■□□□□ 0.94
Pkp1P97350 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pkp1P97350 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pkp1P97350 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.94■□□□□ 0.94
Pkp1P97350 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Pkp1P97350 Gm11927-201ENSMUST00000118472 759 ntBASIC20.94■□□□□ 0.94
Pkp1P97350 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.94■□□□□ 0.94
Pkp1P97350 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.94■□□□□ 0.94
Pkp1P97350 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pkp1P97350 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pkp1P97350 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pkp1P97350 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pkp1P97350 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pkp1P97350 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pkp1P97350 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pkp1P97350 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pkp1P97350 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.93■□□□□ 0.94
Pkp1P97350 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.93■□□□□ 0.94
Pkp1P97350 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.93■□□□□ 0.94
Pkp1P97350 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pkp1P97350 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Pkp1P97350 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pkp1P97350 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pkp1P97350 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Pkp1P97350 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pkp1P97350 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.92■□□□□ 0.94
Pkp1P97350 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pkp1P97350 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms