Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh6P97326 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh6P97326 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh6P97326 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh6P97326 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh6P97326 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh6P97326 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh6P97326 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh6P97326 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh6P97326 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh6P97326 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh6P97326 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh6P97326 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh6P97326 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cdh6P97326 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.18■□□□□ 0.5
Cdh6P97326 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cdh6P97326 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh6P97326 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.18■□□□□ 0.5
Cdh6P97326 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh6P97326 Gm11249-201ENSMUST00000117071 859 ntBASIC18.18■□□□□ 0.5
Cdh6P97326 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh6P97326 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh6P97326 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cdh6P97326 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh6P97326 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh6P97326 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh6P97326 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh6P97326 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cdh6P97326 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh6P97326 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh6P97326 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh6P97326 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh6P97326 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh6P97326 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh6P97326 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh6P97326 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cdh6P97326 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh6P97326 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh6P97326 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh6P97326 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.17■□□□□ 0.5
Cdh6P97326 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh6P97326 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh6P97326 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh6P97326 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.17■□□□□ 0.5
Cdh6P97326 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh6P97326 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh6P97326 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh6P97326 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh6P97326 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh6P97326 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh6P97326 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh6P97326 Gm27275-201ENSMUST00000184318 272 ntBASIC18.16■□□□□ 0.5
Cdh6P97326 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.16■□□□□ 0.5
Cdh6P97326 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh6P97326 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh6P97326 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh6P97326 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh6P97326 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh6P97326 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh6P97326 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Cdh6P97326 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh6P97326 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cdh6P97326 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.15■□□□□ 0.5
Cdh6P97326 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh6P97326 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh6P97326 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.15■□□□□ 0.5
Cdh6P97326 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.15■□□□□ 0.5
Cdh6P97326 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh6P97326 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cdh6P97326 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh6P97326 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh6P97326 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cdh6P97326 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh6P97326 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.15■□□□□ 0.5
Cdh6P97326 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh6P97326 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.15■□□□□ 0.5
Cdh6P97326 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cdh6P97326 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Cdh6P97326 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cdh6P97326 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh6P97326 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh6P97326 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.14■□□□□ 0.49
Cdh6P97326 Gm37856-201ENSMUST00000191634 999 ntBASIC18.14■□□□□ 0.49
Cdh6P97326 Trmt13-210ENSMUST00000198454 880 ntBASIC18.14■□□□□ 0.49
Cdh6P97326 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.14■□□□□ 0.49
Cdh6P97326 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.14■□□□□ 0.49
Cdh6P97326 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh6P97326 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh6P97326 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh6P97326 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh6P97326 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
Cdh6P97326 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh6P97326 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh6P97326 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh6P97326 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh6P97326 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh6P97326 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh6P97326 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh6P97326 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh6P97326 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms