Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SgcdP82347 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SgcdP82347 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SgcdP82347 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.59■□□□□ 0.25
SgcdP82347 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SgcdP82347 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SgcdP82347 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.59■□□□□ 0.25
SgcdP82347 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.59■□□□□ 0.25
SgcdP82347 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.59■□□□□ 0.25
SgcdP82347 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
SgcdP82347 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SgcdP82347 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.59■□□□□ 0.25
SgcdP82347 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SgcdP82347 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SgcdP82347 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SgcdP82347 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SgcdP82347 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SgcdP82347 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SgcdP82347 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.59■□□□□ 0.25
SgcdP82347 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
SgcdP82347 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SgcdP82347 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.58■□□□□ 0.25
SgcdP82347 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SgcdP82347 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SgcdP82347 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SgcdP82347 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SgcdP82347 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
SgcdP82347 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SgcdP82347 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.58■□□□□ 0.24
SgcdP82347 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SgcdP82347 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SgcdP82347 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.58■□□□□ 0.24
SgcdP82347 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SgcdP82347 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SgcdP82347 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.58■□□□□ 0.24
SgcdP82347 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SgcdP82347 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SgcdP82347 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.58■□□□□ 0.24
SgcdP82347 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.58■□□□□ 0.24
SgcdP82347 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.58■□□□□ 0.24
SgcdP82347 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SgcdP82347 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SgcdP82347 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SgcdP82347 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SgcdP82347 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SgcdP82347 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SgcdP82347 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.57■□□□□ 0.24
SgcdP82347 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.57■□□□□ 0.24
SgcdP82347 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.57■□□□□ 0.24
SgcdP82347 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SgcdP82347 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SgcdP82347 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SgcdP82347 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SgcdP82347 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
SgcdP82347 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SgcdP82347 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcdP82347 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SgcdP82347 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcdP82347 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SgcdP82347 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcdP82347 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SgcdP82347 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcdP82347 Gm27011-201ENSMUST00000182352 972 ntBASIC16.56■□□□□ 0.24
SgcdP82347 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.56■□□□□ 0.24
SgcdP82347 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcdP82347 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcdP82347 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcdP82347 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcdP82347 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcdP82347 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.56■□□□□ 0.24
SgcdP82347 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcdP82347 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.56■□□□□ 0.24
SgcdP82347 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcdP82347 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcdP82347 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SgcdP82347 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcdP82347 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcdP82347 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.55■□□□□ 0.24
SgcdP82347 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcdP82347 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcdP82347 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.55■□□□□ 0.24
SgcdP82347 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcdP82347 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcdP82347 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SgcdP82347 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcdP82347 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcdP82347 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SgcdP82347 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcdP82347 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcdP82347 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcdP82347 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcdP82347 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcdP82347 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SgcdP82347 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.55■□□□□ 0.24
SgcdP82347 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcdP82347 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcdP82347 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcdP82347 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcdP82347 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SgcdP82347 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms