Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ldb1P70662 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Ldb1P70662 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Ldb1P70662 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ldb1P70662 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ldb1P70662 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ldb1P70662 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ldb1P70662 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ldb1P70662 Gm12933-201ENSMUST00000120203 872 ntBASIC17.86■□□□□ 0.45
Ldb1P70662 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.86■□□□□ 0.45
Ldb1P70662 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.86■□□□□ 0.45
Ldb1P70662 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.86■□□□□ 0.45
Ldb1P70662 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Ldb1P70662 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Ldb1P70662 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ldb1P70662 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ldb1P70662 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ldb1P70662 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ldb1P70662 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Ldb1P70662 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.85■□□□□ 0.45
Ldb1P70662 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.85■□□□□ 0.45
Ldb1P70662 Gm5408-201ENSMUST00000197998 747 ntBASIC17.85■□□□□ 0.45
Ldb1P70662 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ldb1P70662 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Ldb1P70662 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ldb1P70662 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ldb1P70662 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ldb1P70662 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ldb1P70662 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ldb1P70662 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ldb1P70662 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ldb1P70662 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ldb1P70662 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ldb1P70662 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ldb1P70662 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ldb1P70662 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.84■□□□□ 0.45
Ldb1P70662 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ldb1P70662 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.84■□□□□ 0.45
Ldb1P70662 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Ldb1P70662 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ldb1P70662 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ldb1P70662 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.84■□□□□ 0.45
Ldb1P70662 Rab3c-203ENSMUST00000224180 967 ntBASIC17.84■□□□□ 0.45
Ldb1P70662 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ldb1P70662 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ldb1P70662 Gm10602-201ENSMUST00000098239 609 ntBASIC17.84■□□□□ 0.45
Ldb1P70662 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ldb1P70662 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.84■□□□□ 0.45
Ldb1P70662 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ldb1P70662 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.84■□□□□ 0.45
Ldb1P70662 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ldb1P70662 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Ldb1P70662 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ldb1P70662 Gm44549-201ENSMUST00000208351 577 ntBASIC17.83■□□□□ 0.44
Ldb1P70662 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.83■□□□□ 0.44
Ldb1P70662 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ldb1P70662 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ldb1P70662 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Ldb1P70662 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ldb1P70662 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Ldb1P70662 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ldb1P70662 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ldb1P70662 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ldb1P70662 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ldb1P70662 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ldb1P70662 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ldb1P70662 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ldb1P70662 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ldb1P70662 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ldb1P70662 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ldb1P70662 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ldb1P70662 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ldb1P70662 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ldb1P70662 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ldb1P70662 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Ldb1P70662 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ldb1P70662 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ldb1P70662 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ldb1P70662 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ldb1P70662 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.81■□□□□ 0.44
Ldb1P70662 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ldb1P70662 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.81■□□□□ 0.44
Ldb1P70662 Gm2399-201ENSMUST00000104944 225 ntBASIC17.81■□□□□ 0.44
Ldb1P70662 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Ldb1P70662 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.81■□□□□ 0.44
Ldb1P70662 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ldb1P70662 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ldb1P70662 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.81■□□□□ 0.44
Ldb1P70662 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.81■□□□□ 0.44
Ldb1P70662 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ldb1P70662 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Ldb1P70662 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ldb1P70662 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
Ldb1P70662 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ldb1P70662 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.81■□□□□ 0.44
Ldb1P70662 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ldb1P70662 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
Ldb1P70662 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ldb1P70662 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ldb1P70662 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms