Protein–RNA interactions for Protein: P70279

Surf6, Surfeit locus protein 6, mousemouse

Known RBP Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf6P70279 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Surf6P70279 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Surf6P70279 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Surf6P70279 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Surf6P70279 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Surf6P70279 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.62■□□□□ 0.57
Surf6P70279 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.62■□□□□ 0.57
Surf6P70279 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Surf6P70279 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Surf6P70279 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Surf6P70279 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Surf6P70279 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Surf6P70279 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Surf6P70279 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
Surf6P70279 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Surf6P70279 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Surf6P70279 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Surf6P70279 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Surf6P70279 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Surf6P70279 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Surf6P70279 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Surf6P70279 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Surf6P70279 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Surf6P70279 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Surf6P70279 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Surf6P70279 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Surf6P70279 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Surf6P70279 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.61■□□□□ 0.57
Surf6P70279 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Surf6P70279 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Surf6P70279 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Surf6P70279 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Surf6P70279 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Surf6P70279 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Surf6P70279 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Surf6P70279 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Surf6P70279 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Surf6P70279 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Surf6P70279 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Surf6P70279 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Surf6P70279 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Surf6P70279 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Surf6P70279 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Surf6P70279 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Surf6P70279 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.6■□□□□ 0.57
Surf6P70279 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.6■□□□□ 0.57
Surf6P70279 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Surf6P70279 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Surf6P70279 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
Surf6P70279 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Surf6P70279 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Surf6P70279 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Surf6P70279 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Surf6P70279 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Surf6P70279 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Surf6P70279 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Surf6P70279 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Surf6P70279 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Surf6P70279 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Surf6P70279 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Surf6P70279 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Surf6P70279 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Surf6P70279 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Surf6P70279 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Surf6P70279 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Surf6P70279 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Surf6P70279 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.59■□□□□ 0.57
Surf6P70279 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Surf6P70279 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Surf6P70279 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Surf6P70279 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Surf6P70279 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Surf6P70279 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Surf6P70279 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.58■□□□□ 0.57
Surf6P70279 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Surf6P70279 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Surf6P70279 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Surf6P70279 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Surf6P70279 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Surf6P70279 Tgds-204ENSMUST00000228543 1594 ntBASIC18.58■□□□□ 0.56
Surf6P70279 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Surf6P70279 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Surf6P70279 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Surf6P70279 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Surf6P70279 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Surf6P70279 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Surf6P70279 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Surf6P70279 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Surf6P70279 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Surf6P70279 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Surf6P70279 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Surf6P70279 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Surf6P70279 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Surf6P70279 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.57■□□□□ 0.56
Surf6P70279 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Surf6P70279 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Surf6P70279 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Surf6P70279 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.57■□□□□ 0.56
Surf6P70279 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Surf6P70279 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms