Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim4P70271 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim4P70271 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.92□□□□□ -0.02
Pdlim4P70271 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim4P70271 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Pdlim4P70271 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim4P70271 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim4P70271 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim4P70271 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim4P70271 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim4P70271 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim4P70271 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim4P70271 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim4P70271 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.91□□□□□ -0.02
Pdlim4P70271 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.91□□□□□ -0.02
Pdlim4P70271 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim4P70271 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.91□□□□□ -0.02
Pdlim4P70271 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim4P70271 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
Pdlim4P70271 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim4P70271 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim4P70271 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim4P70271 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim4P70271 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim4P70271 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim4P70271 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim4P70271 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim4P70271 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Pdlim4P70271 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim4P70271 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.9□□□□□ -0.02
Pdlim4P70271 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim4P70271 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Pdlim4P70271 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Pdlim4P70271 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim4P70271 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.9□□□□□ -0.02
Pdlim4P70271 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim4P70271 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.9□□□□□ -0.02
Pdlim4P70271 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim4P70271 Gm12441-201ENSMUST00000121806 588 ntBASIC14.9□□□□□ -0.02
Pdlim4P70271 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim4P70271 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim4P70271 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim4P70271 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim4P70271 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim4P70271 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim4P70271 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pdlim4P70271 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim4P70271 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim4P70271 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim4P70271 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim4P70271 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim4P70271 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.89□□□□□ -0.03
Pdlim4P70271 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Pdlim4P70271 Gm44549-201ENSMUST00000208351 577 ntBASIC14.89□□□□□ -0.03
Pdlim4P70271 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim4P70271 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pdlim4P70271 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim4P70271 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim4P70271 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim4P70271 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.89□□□□□ -0.03
Pdlim4P70271 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim4P70271 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Pdlim4P70271 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pdlim4P70271 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim4P70271 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim4P70271 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pdlim4P70271 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pdlim4P70271 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim4P70271 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.88□□□□□ -0.03
Pdlim4P70271 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim4P70271 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim4P70271 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim4P70271 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim4P70271 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.88□□□□□ -0.03
Pdlim4P70271 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim4P70271 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.88□□□□□ -0.03
Pdlim4P70271 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Pdlim4P70271 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.88□□□□□ -0.03
Pdlim4P70271 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.88□□□□□ -0.03
Pdlim4P70271 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim4P70271 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC14.88□□□□□ -0.03
Pdlim4P70271 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.88□□□□□ -0.03
Pdlim4P70271 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.88□□□□□ -0.03
Pdlim4P70271 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.88□□□□□ -0.03
Pdlim4P70271 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim4P70271 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim4P70271 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim4P70271 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Pdlim4P70271 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim4P70271 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim4P70271 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pdlim4P70271 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim4P70271 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim4P70271 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim4P70271 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Pdlim4P70271 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pdlim4P70271 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim4P70271 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim4P70271 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim4P70271 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms