Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
Crnkl1P63154 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.76■□□□□ 0.43
Crnkl1P63154 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.76■□□□□ 0.43
Crnkl1P63154 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.76■□□□□ 0.43
Crnkl1P63154 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Crnkl1P63154 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Crnkl1P63154 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Crnkl1P63154 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Crnkl1P63154 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Crnkl1P63154 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Crnkl1P63154 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Crnkl1P63154 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Crnkl1P63154 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Crnkl1P63154 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Crnkl1P63154 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Crnkl1P63154 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Crnkl1P63154 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Crnkl1P63154 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Crnkl1P63154 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Crnkl1P63154 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Crnkl1P63154 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Crnkl1P63154 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Crnkl1P63154 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Crnkl1P63154 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Crnkl1P63154 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Crnkl1P63154 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Crnkl1P63154 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Crnkl1P63154 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Crnkl1P63154 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Crnkl1P63154 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Crnkl1P63154 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Crnkl1P63154 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Crnkl1P63154 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Crnkl1P63154 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Crnkl1P63154 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Crnkl1P63154 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Crnkl1P63154 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.74■□□□□ 0.43
Crnkl1P63154 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Crnkl1P63154 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Crnkl1P63154 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.74■□□□□ 0.43
Crnkl1P63154 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Crnkl1P63154 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Crnkl1P63154 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Crnkl1P63154 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Crnkl1P63154 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Crnkl1P63154 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Crnkl1P63154 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Crnkl1P63154 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Crnkl1P63154 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Crnkl1P63154 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Crnkl1P63154 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Crnkl1P63154 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.73■□□□□ 0.43
Crnkl1P63154 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.73■□□□□ 0.43
Crnkl1P63154 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Crnkl1P63154 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Crnkl1P63154 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.73■□□□□ 0.43
Crnkl1P63154 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.73■□□□□ 0.43
Crnkl1P63154 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.73■□□□□ 0.43
Crnkl1P63154 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Crnkl1P63154 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Crnkl1P63154 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.73■□□□□ 0.43
Crnkl1P63154 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Crnkl1P63154 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Crnkl1P63154 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Crnkl1P63154 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Crnkl1P63154 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Crnkl1P63154 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Crnkl1P63154 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Crnkl1P63154 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Crnkl1P63154 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
Crnkl1P63154 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Crnkl1P63154 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Crnkl1P63154 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Crnkl1P63154 Gm26833-201ENSMUST00000180899 440 ntBASIC17.72■□□□□ 0.43
Crnkl1P63154 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Crnkl1P63154 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Crnkl1P63154 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Crnkl1P63154 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Crnkl1P63154 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Crnkl1P63154 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Crnkl1P63154 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Crnkl1P63154 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Crnkl1P63154 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Crnkl1P63154 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Crnkl1P63154 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Crnkl1P63154 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Crnkl1P63154 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Crnkl1P63154 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Crnkl1P63154 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Crnkl1P63154 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.71■□□□□ 0.43
Crnkl1P63154 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Crnkl1P63154 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Crnkl1P63154 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Crnkl1P63154 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Crnkl1P63154 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Crnkl1P63154 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Crnkl1P63154 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Crnkl1P63154 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Crnkl1P63154 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Crnkl1P63154 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms