Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ThraP63058 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
ThraP63058 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ThraP63058 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.14■□□□□ 0.49
ThraP63058 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ThraP63058 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
ThraP63058 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ThraP63058 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
ThraP63058 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.14■□□□□ 0.49
ThraP63058 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ThraP63058 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ThraP63058 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ThraP63058 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ThraP63058 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
ThraP63058 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ThraP63058 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ThraP63058 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ThraP63058 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ThraP63058 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ThraP63058 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ThraP63058 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ThraP63058 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.13■□□□□ 0.49
ThraP63058 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ThraP63058 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ThraP63058 Gm10812-201ENSMUST00000099864 546 ntBASIC18.13■□□□□ 0.49
ThraP63058 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
ThraP63058 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ThraP63058 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ThraP63058 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ThraP63058 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ThraP63058 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ThraP63058 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ThraP63058 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.12■□□□□ 0.49
ThraP63058 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ThraP63058 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
ThraP63058 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ThraP63058 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ThraP63058 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ThraP63058 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ThraP63058 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ThraP63058 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.12■□□□□ 0.49
ThraP63058 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.12■□□□□ 0.49
ThraP63058 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ThraP63058 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ThraP63058 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.12■□□□□ 0.49
ThraP63058 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ThraP63058 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ThraP63058 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ThraP63058 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ThraP63058 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ThraP63058 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ThraP63058 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ThraP63058 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.11■□□□□ 0.49
ThraP63058 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.11■□□□□ 0.49
ThraP63058 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ThraP63058 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.11■□□□□ 0.49
ThraP63058 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ThraP63058 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ThraP63058 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ThraP63058 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ThraP63058 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ThraP63058 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ThraP63058 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
ThraP63058 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ThraP63058 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ThraP63058 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ThraP63058 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ThraP63058 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
ThraP63058 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ThraP63058 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ThraP63058 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ThraP63058 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ThraP63058 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ThraP63058 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ThraP63058 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ThraP63058 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ThraP63058 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ThraP63058 Gm27275-201ENSMUST00000184318 272 ntBASIC18.1■□□□□ 0.49
ThraP63058 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ThraP63058 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ThraP63058 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ThraP63058 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
ThraP63058 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ThraP63058 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ThraP63058 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ThraP63058 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ThraP63058 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ThraP63058 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ThraP63058 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
ThraP63058 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ThraP63058 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ThraP63058 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ThraP63058 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ThraP63058 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ThraP63058 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.09■□□□□ 0.49
ThraP63058 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ThraP63058 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.09■□□□□ 0.49
ThraP63058 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
ThraP63058 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ThraP63058 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms