Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Gm7860-201ENSMUST00000121190 879 ntBASIC14.99□□□□□ -0.01
Lsm5P62322 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC14.99□□□□□ -0.01
Lsm5P62322 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.99□□□□□ -0.01
Lsm5P62322 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm5P62322 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm5P62322 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm5P62322 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm5P62322 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm5P62322 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm5P62322 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm5P62322 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm5P62322 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm5P62322 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm5P62322 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm5P62322 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Lsm5P62322 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.99□□□□□ -0.01
Lsm5P62322 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.99□□□□□ -0.01
Lsm5P62322 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm5P62322 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm5P62322 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm5P62322 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm5P62322 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm5P62322 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm5P62322 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm5P62322 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm5P62322 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm5P62322 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm5P62322 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm5P62322 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm5P62322 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC14.98□□□□□ -0.01
Lsm5P62322 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC14.98□□□□□ -0.01
Lsm5P62322 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm5P62322 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm5P62322 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.98□□□□□ -0.01
Lsm5P62322 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm5P62322 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Lsm5P62322 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm5P62322 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm5P62322 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm5P62322 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm5P62322 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Lsm5P62322 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Lsm5P62322 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm5P62322 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm5P62322 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm5P62322 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Lsm5P62322 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm5P62322 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Lsm5P62322 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.97□□□□□ -0.01
Lsm5P62322 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.97□□□□□ -0.01
Lsm5P62322 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm5P62322 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm5P62322 Gm22238-201ENSMUST00000175222 88 ntBASIC14.97□□□□□ -0.01
Lsm5P62322 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm5P62322 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm5P62322 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm5P62322 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm5P62322 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm5P62322 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm5P62322 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm5P62322 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Lsm5P62322 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm5P62322 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm5P62322 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm5P62322 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm5P62322 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lsm5P62322 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm5P62322 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm5P62322 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm5P62322 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm5P62322 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Lsm5P62322 Gm8969-201ENSMUST00000199694 526 ntBASIC14.96□□□□□ -0.01
Lsm5P62322 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC14.96□□□□□ -0.01
Lsm5P62322 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm5P62322 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC14.96□□□□□ -0.01
Lsm5P62322 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm5P62322 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm5P62322 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Lsm5P62322 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm5P62322 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm5P62322 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm5P62322 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lsm5P62322 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
Lsm5P62322 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Lsm5P62322 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Lsm5P62322 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Lsm5P62322 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm5P62322 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Lsm5P62322 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.95□□□□□ -0.02
Lsm5P62322 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm5P62322 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC14.95□□□□□ -0.02
Lsm5P62322 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Lsm5P62322 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm5P62322 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm5P62322 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm5P62322 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm5P62322 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm5P62322 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm5P62322 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lsm5P62322 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms