Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nup43P59235 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nup43P59235 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.96■□□□□ 0.3
Nup43P59235 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nup43P59235 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nup43P59235 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Nup43P59235 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Nup43P59235 Trmt13-210ENSMUST00000198454 880 ntBASIC16.95■□□□□ 0.3
Nup43P59235 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nup43P59235 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nup43P59235 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nup43P59235 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nup43P59235 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Nup43P59235 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Nup43P59235 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nup43P59235 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nup43P59235 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nup43P59235 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nup43P59235 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Nup43P59235 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
Nup43P59235 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Nup43P59235 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nup43P59235 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nup43P59235 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.94■□□□□ 0.3
Nup43P59235 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nup43P59235 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nup43P59235 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.94■□□□□ 0.3
Nup43P59235 Mtag2-201ENSMUST00000058665 714 ntBASIC16.94■□□□□ 0.3
Nup43P59235 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.94■□□□□ 0.3
Nup43P59235 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nup43P59235 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nup43P59235 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nup43P59235 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Nup43P59235 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nup43P59235 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.94■□□□□ 0.3
Nup43P59235 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nup43P59235 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nup43P59235 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nup43P59235 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.94■□□□□ 0.3
Nup43P59235 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nup43P59235 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup43P59235 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup43P59235 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup43P59235 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nup43P59235 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nup43P59235 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup43P59235 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup43P59235 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Nup43P59235 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Nup43P59235 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup43P59235 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup43P59235 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Nup43P59235 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.93■□□□□ 0.3
Nup43P59235 Gm10653-202ENSMUST00000139570 835 ntBASIC16.93■□□□□ 0.3
Nup43P59235 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Nup43P59235 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup43P59235 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup43P59235 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup43P59235 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup43P59235 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nup43P59235 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Nup43P59235 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup43P59235 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup43P59235 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Nup43P59235 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nup43P59235 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
Nup43P59235 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup43P59235 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nup43P59235 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.92■□□□□ 0.3
Nup43P59235 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.92■□□□□ 0.3
Nup43P59235 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nup43P59235 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.92■□□□□ 0.3
Nup43P59235 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup43P59235 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup43P59235 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup43P59235 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup43P59235 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup43P59235 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.91■□□□□ 0.3
Nup43P59235 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup43P59235 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup43P59235 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup43P59235 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.91■□□□□ 0.3
Nup43P59235 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.91■□□□□ 0.3
Nup43P59235 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.91■□□□□ 0.3
Nup43P59235 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.91■□□□□ 0.3
Nup43P59235 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup43P59235 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup43P59235 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup43P59235 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.91■□□□□ 0.3
Nup43P59235 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup43P59235 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup43P59235 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup43P59235 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup43P59235 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
Nup43P59235 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup43P59235 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup43P59235 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Nup43P59235 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup43P59235 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nup43P59235 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms