Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkn2bP55271 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkn2bP55271 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkn2bP55271 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkn2bP55271 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkn2bP55271 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkn2bP55271 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Cdkn2bP55271 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cdkn2bP55271 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cdkn2bP55271 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cdkn2bP55271 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cdkn2bP55271 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cdkn2bP55271 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkn2bP55271 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cdkn2bP55271 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.2■□□□□ 0.34
Cdkn2bP55271 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
Cdkn2bP55271 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkn2bP55271 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.2■□□□□ 0.34
Cdkn2bP55271 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.2■□□□□ 0.34
Cdkn2bP55271 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkn2bP55271 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkn2bP55271 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkn2bP55271 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkn2bP55271 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkn2bP55271 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cdkn2bP55271 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkn2bP55271 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkn2bP55271 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cdkn2bP55271 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.19■□□□□ 0.34
Cdkn2bP55271 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkn2bP55271 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkn2bP55271 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkn2bP55271 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkn2bP55271 Gm6420-201ENSMUST00000193885 723 ntBASIC17.19■□□□□ 0.34
Cdkn2bP55271 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkn2bP55271 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkn2bP55271 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cdkn2bP55271 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdkn2bP55271 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdkn2bP55271 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cdkn2bP55271 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Cdkn2bP55271 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cdkn2bP55271 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cdkn2bP55271 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdkn2bP55271 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdkn2bP55271 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cdkn2bP55271 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cdkn2bP55271 Nespas-201ENSMUST00000143738 1083 ntBASIC17.18■□□□□ 0.34
Cdkn2bP55271 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Cdkn2bP55271 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.18■□□□□ 0.34
Cdkn2bP55271 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cdkn2bP55271 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdkn2bP55271 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdkn2bP55271 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Cdkn2bP55271 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdkn2bP55271 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.17■□□□□ 0.34
Cdkn2bP55271 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdkn2bP55271 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cdkn2bP55271 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cdkn2bP55271 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdkn2bP55271 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdkn2bP55271 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.17■□□□□ 0.34
Cdkn2bP55271 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.17■□□□□ 0.34
Cdkn2bP55271 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cdkn2bP55271 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdkn2bP55271 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdkn2bP55271 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.17■□□□□ 0.34
Cdkn2bP55271 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkn2bP55271 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.16■□□□□ 0.34
Cdkn2bP55271 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkn2bP55271 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkn2bP55271 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.16■□□□□ 0.34
Cdkn2bP55271 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.16■□□□□ 0.34
Cdkn2bP55271 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkn2bP55271 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkn2bP55271 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkn2bP55271 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.16■□□□□ 0.34
Cdkn2bP55271 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkn2bP55271 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkn2bP55271 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.16■□□□□ 0.34
Cdkn2bP55271 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.16■□□□□ 0.34
Cdkn2bP55271 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Cdkn2bP55271 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.16■□□□□ 0.34
Cdkn2bP55271 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkn2bP55271 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cdkn2bP55271 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cdkn2bP55271 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkn2bP55271 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkn2bP55271 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkn2bP55271 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkn2bP55271 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdkn2bP55271 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.15■□□□□ 0.34
Cdkn2bP55271 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdkn2bP55271 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdkn2bP55271 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdkn2bP55271 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdkn2bP55271 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdkn2bP55271 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdkn2bP55271 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdkn2bP55271 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms