Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.01■□□□□ 0.63
NcanP55066 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NcanP55066 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NcanP55066 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.01■□□□□ 0.63
NcanP55066 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NcanP55066 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NcanP55066 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NcanP55066 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19■□□□□ 0.63
NcanP55066 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC19■□□□□ 0.63
NcanP55066 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NcanP55066 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NcanP55066 Gm27742-201ENSMUST00000184667 60 ntBASIC19■□□□□ 0.63
NcanP55066 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC19■□□□□ 0.63
NcanP55066 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NcanP55066 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19■□□□□ 0.63
NcanP55066 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
NcanP55066 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
NcanP55066 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NcanP55066 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
NcanP55066 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19■□□□□ 0.63
NcanP55066 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NcanP55066 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.99■□□□□ 0.63
NcanP55066 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
NcanP55066 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NcanP55066 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NcanP55066 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
NcanP55066 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NcanP55066 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
NcanP55066 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NcanP55066 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NcanP55066 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NcanP55066 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NcanP55066 Gm11355-201ENSMUST00000121120 306 ntBASIC18.98■□□□□ 0.63
NcanP55066 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NcanP55066 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NcanP55066 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NcanP55066 Gm27525-201ENSMUST00000184465 107 ntBASIC18.98■□□□□ 0.63
NcanP55066 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NcanP55066 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
NcanP55066 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NcanP55066 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NcanP55066 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
NcanP55066 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NcanP55066 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NcanP55066 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NcanP55066 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NcanP55066 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NcanP55066 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NcanP55066 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NcanP55066 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
NcanP55066 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NcanP55066 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NcanP55066 Gm18733-201ENSMUST00000173950 856 ntBASIC18.97■□□□□ 0.63
NcanP55066 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NcanP55066 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.97■□□□□ 0.63
NcanP55066 Gm10566-201ENSMUST00000086739 996 ntBASIC18.97■□□□□ 0.63
NcanP55066 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
NcanP55066 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NcanP55066 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NcanP55066 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NcanP55066 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.97■□□□□ 0.63
NcanP55066 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
NcanP55066 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NcanP55066 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
NcanP55066 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NcanP55066 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NcanP55066 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.96■□□□□ 0.63
NcanP55066 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NcanP55066 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NcanP55066 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
NcanP55066 Gm18206-201ENSMUST00000207027 926 ntBASIC18.96■□□□□ 0.63
NcanP55066 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
NcanP55066 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NcanP55066 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NcanP55066 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NcanP55066 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
NcanP55066 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NcanP55066 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
NcanP55066 Gm24841-201ENSMUST00000158676 357 ntBASIC18.95■□□□□ 0.62
NcanP55066 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NcanP55066 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.95■□□□□ 0.62
NcanP55066 Gm5864-201ENSMUST00000202263 970 ntBASIC18.95■□□□□ 0.62
NcanP55066 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NcanP55066 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NcanP55066 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NcanP55066 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.95■□□□□ 0.62
NcanP55066 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NcanP55066 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NcanP55066 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
NcanP55066 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NcanP55066 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
NcanP55066 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NcanP55066 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NcanP55066 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
NcanP55066 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.94■□□□□ 0.62
NcanP55066 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
NcanP55066 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.94■□□□□ 0.62
NcanP55066 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NcanP55066 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NcanP55066 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms