Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Nub1P54729 Dio3-201ENSMUST00000097228 1449 ntBASIC19.29■□□□□ 0.68
Nub1P54729 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.29■□□□□ 0.68
Nub1P54729 Gm2559-201ENSMUST00000201323 363 ntBASIC19.29■□□□□ 0.68
Nub1P54729 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nub1P54729 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nub1P54729 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nub1P54729 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nub1P54729 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nub1P54729 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nub1P54729 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nub1P54729 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nub1P54729 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nub1P54729 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nub1P54729 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.28■□□□□ 0.68
Nub1P54729 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.28■□□□□ 0.68
Nub1P54729 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nub1P54729 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nub1P54729 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nub1P54729 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nub1P54729 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nub1P54729 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.28■□□□□ 0.68
Nub1P54729 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nub1P54729 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nub1P54729 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nub1P54729 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nub1P54729 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nub1P54729 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nub1P54729 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.68
Nub1P54729 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.27■□□□□ 0.68
Nub1P54729 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nub1P54729 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nub1P54729 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nub1P54729 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nub1P54729 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
Nub1P54729 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Nub1P54729 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nub1P54729 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nub1P54729 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nub1P54729 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nub1P54729 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nub1P54729 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Nub1P54729 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Nub1P54729 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nub1P54729 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nub1P54729 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nub1P54729 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.26■□□□□ 0.67
Nub1P54729 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nub1P54729 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.26■□□□□ 0.67
Nub1P54729 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.26■□□□□ 0.67
Nub1P54729 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nub1P54729 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Nub1P54729 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nub1P54729 Zfp783-201ENSMUST00000095946 670 ntBASIC19.26■□□□□ 0.67
Nub1P54729 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nub1P54729 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nub1P54729 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nub1P54729 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nub1P54729 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nub1P54729 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nub1P54729 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nub1P54729 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.25■□□□□ 0.67
Nub1P54729 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nub1P54729 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nub1P54729 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nub1P54729 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nub1P54729 Flg-201ENSMUST00000050758 1488 ntBASIC19.25■□□□□ 0.67
Nub1P54729 Gm11927-201ENSMUST00000118472 759 ntBASIC19.25■□□□□ 0.67
Nub1P54729 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nub1P54729 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nub1P54729 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.25■□□□□ 0.67
Nub1P54729 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nub1P54729 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Nub1P54729 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nub1P54729 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Nub1P54729 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nub1P54729 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nub1P54729 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nub1P54729 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nub1P54729 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nub1P54729 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Nub1P54729 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nub1P54729 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.24■□□□□ 0.67
Nub1P54729 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nub1P54729 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nub1P54729 Gm27275-201ENSMUST00000184318 272 ntBASIC19.24■□□□□ 0.67
Nub1P54729 Gm38285-201ENSMUST00000192928 922 ntBASIC19.24■□□□□ 0.67
Nub1P54729 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.24■□□□□ 0.67
Nub1P54729 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Nub1P54729 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nub1P54729 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Nub1P54729 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nub1P54729 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Nub1P54729 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nub1P54729 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nub1P54729 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nub1P54729 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nub1P54729 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nub1P54729 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nub1P54729 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms