Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Msh6P54276 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Msh6P54276 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Msh6P54276 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC22.87■■□□□ 1.25
Msh6P54276 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Msh6P54276 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Msh6P54276 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Msh6P54276 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Msh6P54276 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC22.86■■□□□ 1.25
Msh6P54276 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Msh6P54276 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Msh6P54276 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Msh6P54276 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
Msh6P54276 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC22.86■■□□□ 1.25
Msh6P54276 Gm10517-202ENSMUST00000192970 758 ntBASIC22.86■■□□□ 1.25
Msh6P54276 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Msh6P54276 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Msh6P54276 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Msh6P54276 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Msh6P54276 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Msh6P54276 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC22.85■■□□□ 1.25
Msh6P54276 Gm6345-202ENSMUST00000180900 204 ntBASIC22.85■■□□□ 1.25
Msh6P54276 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
Msh6P54276 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Msh6P54276 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Msh6P54276 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Msh6P54276 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Msh6P54276 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Msh6P54276 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Msh6P54276 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Msh6P54276 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC22.84■■□□□ 1.25
Msh6P54276 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC22.84■■□□□ 1.25
Msh6P54276 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Msh6P54276 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Msh6P54276 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Msh6P54276 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Msh6P54276 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Msh6P54276 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Msh6P54276 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Msh6P54276 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
Msh6P54276 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Msh6P54276 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC22.83■■□□□ 1.25
Msh6P54276 Gm27741-201ENSMUST00000185060 237 ntBASIC22.83■■□□□ 1.25
Msh6P54276 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Msh6P54276 Gm45058-201ENSMUST00000205810 766 ntBASIC22.83■■□□□ 1.25
Msh6P54276 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC22.82■■□□□ 1.24
Msh6P54276 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Msh6P54276 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Msh6P54276 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Msh6P54276 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Msh6P54276 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC22.82■■□□□ 1.24
Msh6P54276 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Msh6P54276 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Msh6P54276 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC22.82■■□□□ 1.24
Msh6P54276 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Msh6P54276 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Msh6P54276 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Msh6P54276 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Msh6P54276 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Msh6P54276 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
Msh6P54276 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Msh6P54276 Gm10013-201ENSMUST00000106074 672 ntBASIC22.81■■□□□ 1.24
Msh6P54276 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC22.81■■□□□ 1.24
Msh6P54276 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Msh6P54276 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Msh6P54276 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Msh6P54276 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC22.81■■□□□ 1.24
Msh6P54276 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC22.81■■□□□ 1.24
Msh6P54276 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Msh6P54276 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Msh6P54276 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Msh6P54276 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Msh6P54276 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Msh6P54276 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Msh6P54276 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC22.8■■□□□ 1.24
Msh6P54276 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Msh6P54276 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC22.8■■□□□ 1.24
Msh6P54276 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC22.8■■□□□ 1.24
Msh6P54276 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC22.8■■□□□ 1.24
Msh6P54276 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Msh6P54276 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC22.8■■□□□ 1.24
Msh6P54276 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
Msh6P54276 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Msh6P54276 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Msh6P54276 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Msh6P54276 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Msh6P54276 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Msh6P54276 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Msh6P54276 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Msh6P54276 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Msh6P54276 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Msh6P54276 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Msh6P54276 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Msh6P54276 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC22.78■■□□□ 1.24
Msh6P54276 AA414768-201ENSMUST00000121924 1257 ntBASIC22.78■■□□□ 1.24
Msh6P54276 Gm33142-201ENSMUST00000193913 867 ntBASIC22.78■■□□□ 1.24
Msh6P54276 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Msh6P54276 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Msh6P54276 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Msh6P54276 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms