Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmga2P52927 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmga2P52927 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Hmga2P52927 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Hmga2P52927 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmga2P52927 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmga2P52927 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Hmga2P52927 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Hmga2P52927 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmga2P52927 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmga2P52927 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.3■□□□□ 0.04
Hmga2P52927 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.3■□□□□ 0.04
Hmga2P52927 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmga2P52927 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmga2P52927 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmga2P52927 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmga2P52927 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmga2P52927 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmga2P52927 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmga2P52927 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmga2P52927 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Hmga2P52927 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmga2P52927 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmga2P52927 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmga2P52927 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.28■□□□□ 0.04
Hmga2P52927 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmga2P52927 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmga2P52927 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmga2P52927 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmga2P52927 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmga2P52927 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmga2P52927 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.28■□□□□ 0.04
Hmga2P52927 Gm13146-201ENSMUST00000118508 780 ntBASIC15.28■□□□□ 0.04
Hmga2P52927 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Hmga2P52927 Gm22325-201ENSMUST00000158904 308 ntBASIC15.28■□□□□ 0.04
Hmga2P52927 Gm21956-201ENSMUST00000179946 522 ntBASIC15.28■□□□□ 0.04
Hmga2P52927 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmga2P52927 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmga2P52927 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.28■□□□□ 0.04
Hmga2P52927 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmga2P52927 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.28■□□□□ 0.04
Hmga2P52927 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmga2P52927 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmga2P52927 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmga2P52927 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmga2P52927 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmga2P52927 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmga2P52927 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmga2P52927 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Hmga2P52927 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Hmga2P52927 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmga2P52927 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmga2P52927 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmga2P52927 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Hmga2P52927 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hmga2P52927 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.27■□□□□ 0.04
Hmga2P52927 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmga2P52927 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmga2P52927 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Hmga2P52927 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmga2P52927 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Hmga2P52927 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmga2P52927 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmga2P52927 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmga2P52927 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmga2P52927 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmga2P52927 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmga2P52927 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Hmga2P52927 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmga2P52927 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Hmga2P52927 Gm13534-201ENSMUST00000121169 513 ntBASIC15.26■□□□□ 0.03
Hmga2P52927 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
Hmga2P52927 Gm26833-201ENSMUST00000180899 440 ntBASIC15.26■□□□□ 0.03
Hmga2P52927 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmga2P52927 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Hmga2P52927 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmga2P52927 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmga2P52927 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmga2P52927 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Hmga2P52927 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmga2P52927 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmga2P52927 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmga2P52927 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.25■□□□□ 0.03
Hmga2P52927 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Hmga2P52927 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hmga2P52927 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Hmga2P52927 Gm13241-201ENSMUST00000094493 780 ntBASIC15.25■□□□□ 0.03
Hmga2P52927 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmga2P52927 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmga2P52927 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmga2P52927 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmga2P52927 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hmga2P52927 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.25■□□□□ 0.03
Hmga2P52927 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Hmga2P52927 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Hmga2P52927 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmga2P52927 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Hmga2P52927 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmga2P52927 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Hmga2P52927 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms