Protein–RNA interactions for Protein: P51944

Ccnf, Cyclin-F, mousemouse

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnfP51944 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CcnfP51944 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CcnfP51944 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CcnfP51944 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CcnfP51944 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CcnfP51944 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CcnfP51944 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CcnfP51944 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CcnfP51944 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CcnfP51944 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CcnfP51944 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CcnfP51944 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CcnfP51944 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CcnfP51944 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.1■□□□□ 0.33
CcnfP51944 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.1■□□□□ 0.33
CcnfP51944 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CcnfP51944 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CcnfP51944 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CcnfP51944 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CcnfP51944 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CcnfP51944 Gm22325-201ENSMUST00000158904 308 ntBASIC17.09■□□□□ 0.33
CcnfP51944 Gm21956-201ENSMUST00000179946 522 ntBASIC17.09■□□□□ 0.33
CcnfP51944 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CcnfP51944 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CcnfP51944 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CcnfP51944 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.09■□□□□ 0.33
CcnfP51944 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CcnfP51944 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CcnfP51944 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CcnfP51944 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CcnfP51944 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CcnfP51944 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.09■□□□□ 0.33
CcnfP51944 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CcnfP51944 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.08■□□□□ 0.33
CcnfP51944 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CcnfP51944 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CcnfP51944 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CcnfP51944 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CcnfP51944 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CcnfP51944 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CcnfP51944 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.08■□□□□ 0.32
CcnfP51944 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.08■□□□□ 0.32
CcnfP51944 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CcnfP51944 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.08■□□□□ 0.32
CcnfP51944 Gm26833-201ENSMUST00000180899 440 ntBASIC17.08■□□□□ 0.32
CcnfP51944 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.08■□□□□ 0.32
CcnfP51944 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CcnfP51944 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CcnfP51944 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CcnfP51944 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CcnfP51944 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.08■□□□□ 0.32
CcnfP51944 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CcnfP51944 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CcnfP51944 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CcnfP51944 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CcnfP51944 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.07■□□□□ 0.32
CcnfP51944 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CcnfP51944 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CcnfP51944 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.07■□□□□ 0.32
CcnfP51944 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CcnfP51944 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CcnfP51944 Gm13534-201ENSMUST00000121169 513 ntBASIC17.07■□□□□ 0.32
CcnfP51944 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.07■□□□□ 0.32
CcnfP51944 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
CcnfP51944 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CcnfP51944 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CcnfP51944 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.07■□□□□ 0.32
CcnfP51944 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CcnfP51944 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CcnfP51944 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CcnfP51944 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CcnfP51944 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CcnfP51944 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CcnfP51944 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CcnfP51944 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CcnfP51944 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CcnfP51944 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CcnfP51944 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CcnfP51944 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CcnfP51944 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CcnfP51944 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CcnfP51944 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CcnfP51944 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CcnfP51944 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CcnfP51944 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CcnfP51944 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CcnfP51944 Haglr-201ENSMUST00000100000 2085 ntBASIC17.05■□□□□ 0.32
CcnfP51944 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CcnfP51944 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CcnfP51944 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CcnfP51944 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CcnfP51944 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CcnfP51944 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CcnfP51944 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CcnfP51944 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CcnfP51944 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CcnfP51944 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CcnfP51944 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.05■□□□□ 0.32
CcnfP51944 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CcnfP51944 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms