Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TubP50586 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TubP50586 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TubP50586 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TubP50586 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TubP50586 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TubP50586 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TubP50586 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TubP50586 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
TubP50586 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.37■□□□□ 0.53
TubP50586 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TubP50586 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TubP50586 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TubP50586 Gm13168-201ENSMUST00000121771 632 ntBASIC18.36■□□□□ 0.53
TubP50586 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TubP50586 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TubP50586 Gm18666-201ENSMUST00000190039 958 ntBASIC18.36■□□□□ 0.53
TubP50586 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TubP50586 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TubP50586 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TubP50586 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TubP50586 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TubP50586 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TubP50586 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TubP50586 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TubP50586 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TubP50586 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TubP50586 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TubP50586 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TubP50586 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TubP50586 Gm5643-201ENSMUST00000117081 966 ntBASIC18.35■□□□□ 0.53
TubP50586 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TubP50586 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TubP50586 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TubP50586 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TubP50586 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TubP50586 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TubP50586 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.34■□□□□ 0.53
TubP50586 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TubP50586 Gm8520-201ENSMUST00000186517 868 ntBASIC18.34■□□□□ 0.53
TubP50586 Gm10138-203ENSMUST00000206952 366 ntBASIC18.34■□□□□ 0.53
TubP50586 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TubP50586 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TubP50586 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TubP50586 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TubP50586 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TubP50586 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TubP50586 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TubP50586 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TubP50586 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TubP50586 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.33■□□□□ 0.53
TubP50586 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TubP50586 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.33■□□□□ 0.53
TubP50586 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TubP50586 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TubP50586 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TubP50586 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
TubP50586 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
TubP50586 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
TubP50586 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TubP50586 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TubP50586 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TubP50586 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TubP50586 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TubP50586 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.33■□□□□ 0.52
TubP50586 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TubP50586 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TubP50586 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TubP50586 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TubP50586 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TubP50586 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TubP50586 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TubP50586 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TubP50586 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TubP50586 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TubP50586 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TubP50586 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TubP50586 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TubP50586 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TubP50586 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TubP50586 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TubP50586 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.32■□□□□ 0.52
TubP50586 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TubP50586 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TubP50586 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TubP50586 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TubP50586 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TubP50586 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TubP50586 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.31■□□□□ 0.52
TubP50586 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TubP50586 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TubP50586 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TubP50586 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TubP50586 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TubP50586 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TubP50586 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.31■□□□□ 0.52
TubP50586 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TubP50586 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TubP50586 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.31■□□□□ 0.52
TubP50586 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms