Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GdnfP48540 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GdnfP48540 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GdnfP48540 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
GdnfP48540 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GdnfP48540 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.71■□□□□ 0.11
GdnfP48540 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.71■□□□□ 0.11
GdnfP48540 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GdnfP48540 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.71■□□□□ 0.11
GdnfP48540 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.71■□□□□ 0.11
GdnfP48540 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.71■□□□□ 0.11
GdnfP48540 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.71■□□□□ 0.11
GdnfP48540 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.71■□□□□ 0.11
GdnfP48540 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
GdnfP48540 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GdnfP48540 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GdnfP48540 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
GdnfP48540 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
GdnfP48540 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GdnfP48540 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.7■□□□□ 0.1
GdnfP48540 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.7■□□□□ 0.1
GdnfP48540 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GdnfP48540 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GdnfP48540 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.7■□□□□ 0.1
GdnfP48540 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GdnfP48540 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GdnfP48540 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GdnfP48540 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GdnfP48540 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GdnfP48540 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GdnfP48540 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.7■□□□□ 0.1
GdnfP48540 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GdnfP48540 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
GdnfP48540 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GdnfP48540 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.69■□□□□ 0.1
GdnfP48540 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GdnfP48540 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GdnfP48540 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GdnfP48540 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GdnfP48540 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.69■□□□□ 0.1
GdnfP48540 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GdnfP48540 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GdnfP48540 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
GdnfP48540 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
GdnfP48540 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
GdnfP48540 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
GdnfP48540 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
GdnfP48540 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GdnfP48540 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
GdnfP48540 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GdnfP48540 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
GdnfP48540 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GdnfP48540 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GdnfP48540 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GdnfP48540 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
GdnfP48540 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
GdnfP48540 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GdnfP48540 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GdnfP48540 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GdnfP48540 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.68■□□□□ 0.1
GdnfP48540 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GdnfP48540 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
GdnfP48540 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GdnfP48540 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.68■□□□□ 0.1
GdnfP48540 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GdnfP48540 Gm5874-201ENSMUST00000096101 508 ntBASIC15.68■□□□□ 0.1
GdnfP48540 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GdnfP48540 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GdnfP48540 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GdnfP48540 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
GdnfP48540 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GdnfP48540 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
GdnfP48540 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
GdnfP48540 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
GdnfP48540 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GdnfP48540 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
GdnfP48540 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GdnfP48540 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GdnfP48540 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GdnfP48540 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GdnfP48540 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GdnfP48540 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GdnfP48540 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GdnfP48540 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GdnfP48540 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GdnfP48540 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GdnfP48540 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GdnfP48540 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.67■□□□□ 0.1
GdnfP48540 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
GdnfP48540 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GdnfP48540 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GdnfP48540 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.67■□□□□ 0.1
GdnfP48540 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GdnfP48540 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
GdnfP48540 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
GdnfP48540 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GdnfP48540 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.66■□□□□ 0.1
GdnfP48540 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GdnfP48540 Gm13234-201ENSMUST00000120010 747 ntBASIC15.66■□□□□ 0.1
GdnfP48540 Gm18284-201ENSMUST00000172604 624 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms