Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox2P48432 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox2P48432 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.85■□□□□ 0.29
Sox2P48432 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.85■□□□□ 0.29
Sox2P48432 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.85■□□□□ 0.29
Sox2P48432 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sox2P48432 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox2P48432 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox2P48432 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sox2P48432 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox2P48432 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Sox2P48432 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox2P48432 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox2P48432 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sox2P48432 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sox2P48432 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Sox2P48432 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox2P48432 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox2P48432 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sox2P48432 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.84■□□□□ 0.29
Sox2P48432 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sox2P48432 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.84■□□□□ 0.29
Sox2P48432 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.84■□□□□ 0.29
Sox2P48432 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox2P48432 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox2P48432 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.84■□□□□ 0.29
Sox2P48432 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox2P48432 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.84■□□□□ 0.29
Sox2P48432 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sox2P48432 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.84■□□□□ 0.29
Sox2P48432 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox2P48432 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox2P48432 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox2P48432 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox2P48432 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox2P48432 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.84■□□□□ 0.29
Sox2P48432 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Sox2P48432 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sox2P48432 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
Sox2P48432 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Sox2P48432 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Sox2P48432 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Sox2P48432 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox2P48432 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.83■□□□□ 0.28
Sox2P48432 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sox2P48432 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.83■□□□□ 0.28
Sox2P48432 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.83■□□□□ 0.28
Sox2P48432 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sox2P48432 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox2P48432 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox2P48432 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox2P48432 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Sox2P48432 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox2P48432 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox2P48432 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox2P48432 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Sox2P48432 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Sox2P48432 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox2P48432 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox2P48432 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox2P48432 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.82■□□□□ 0.28
Sox2P48432 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Sox2P48432 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox2P48432 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox2P48432 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox2P48432 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Sox2P48432 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox2P48432 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox2P48432 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox2P48432 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Sox2P48432 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Sox2P48432 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox2P48432 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox2P48432 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox2P48432 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox2P48432 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Sox2P48432 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox2P48432 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox2P48432 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox2P48432 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox2P48432 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.81■□□□□ 0.28
Sox2P48432 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.81■□□□□ 0.28
Sox2P48432 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.81■□□□□ 0.28
Sox2P48432 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox2P48432 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox2P48432 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sox2P48432 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox2P48432 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox2P48432 Gm6139-201ENSMUST00000079261 882 ntBASIC16.81■□□□□ 0.28
Sox2P48432 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox2P48432 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Sox2P48432 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox2P48432 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sox2P48432 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
Sox2P48432 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox2P48432 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.8■□□□□ 0.28
Sox2P48432 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox2P48432 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sox2P48432 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Sox2P48432 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms