Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.21■□□□□ 0.51
Vps4bP46467 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Vps4bP46467 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps4bP46467 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps4bP46467 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Vps4bP46467 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps4bP46467 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps4bP46467 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps4bP46467 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Vps4bP46467 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps4bP46467 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Vps4bP46467 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps4bP46467 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps4bP46467 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps4bP46467 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps4bP46467 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Vps4bP46467 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Vps4bP46467 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps4bP46467 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps4bP46467 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Vps4bP46467 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.2■□□□□ 0.5
Vps4bP46467 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps4bP46467 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.2■□□□□ 0.5
Vps4bP46467 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps4bP46467 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Vps4bP46467 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Vps4bP46467 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.2■□□□□ 0.5
Vps4bP46467 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.2■□□□□ 0.5
Vps4bP46467 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Vps4bP46467 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.2■□□□□ 0.5
Vps4bP46467 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Vps4bP46467 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Vps4bP46467 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps4bP46467 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps4bP46467 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Vps4bP46467 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps4bP46467 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Vps4bP46467 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps4bP46467 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps4bP46467 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.19■□□□□ 0.5
Vps4bP46467 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Vps4bP46467 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps4bP46467 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps4bP46467 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Vps4bP46467 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Vps4bP46467 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps4bP46467 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.19■□□□□ 0.5
Vps4bP46467 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Vps4bP46467 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Vps4bP46467 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Vps4bP46467 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Vps4bP46467 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps4bP46467 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps4bP46467 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Vps4bP46467 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Vps4bP46467 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Vps4bP46467 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps4bP46467 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vps4bP46467 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps4bP46467 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Vps4bP46467 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.18■□□□□ 0.5
Vps4bP46467 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps4bP46467 Gm10602-201ENSMUST00000098239 609 ntBASIC18.18■□□□□ 0.5
Vps4bP46467 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps4bP46467 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.18■□□□□ 0.5
Vps4bP46467 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Vps4bP46467 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps4bP46467 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps4bP46467 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps4bP46467 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps4bP46467 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps4bP46467 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.17■□□□□ 0.5
Vps4bP46467 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps4bP46467 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps4bP46467 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps4bP46467 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps4bP46467 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Vps4bP46467 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vps4bP46467 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Vps4bP46467 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps4bP46467 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps4bP46467 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.16■□□□□ 0.5
Vps4bP46467 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps4bP46467 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps4bP46467 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Vps4bP46467 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps4bP46467 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vps4bP46467 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps4bP46467 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vps4bP46467 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vps4bP46467 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps4bP46467 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps4bP46467 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps4bP46467 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps4bP46467 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps4bP46467 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Vps4bP46467 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps4bP46467 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps4bP46467 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Vps4bP46467 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms